PROJECT INFORMATION
GOLD Project ID
Gp0023695  
Project Name
Actinomadura madurae NBRC 14623  
Other Names
  
Legacy ER Project ID
28932  
Legacy GOLD ID
Gi20892  
NCBI BioProject Name Actinomadura madurae NBRC 14623
NCBI BioProject ID 172586
NCBI BioProject Accession PRJDB387
NCBI Locus Tag
AMA01S  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-08-29
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Comparative genomics of Actinomadura isolates  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Actinomadura madurae NBRC 14623
Organism Actinomadura madurae NBRC 14623
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0023695
Organism Name
Actinomadura madurae NBRC 14623  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Actinomadura  
Genus Synonyms
  
Species
Actinomadura madurae  
Subspecies
  
Species Synonyms
  
Strain
NCTC 5654  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 14623  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7573  
Exemplar Name
Actinomadura madurae  
Taxon DOI
10.1601/tx.7573  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1220569
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptosporangiales  
NCBI Family
Thermomonosporaceae  
NCBI Genus
Actinomadura  
NCBI Species
Actinomadura madurae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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