PROJECT INFORMATION
GOLD Project ID
Gp0023124  
Project Name
Gordonia namibiensis NBRC 108229  
Other Names
  
Legacy ER Project ID
28100  
Legacy GOLD ID
Gi20114  
NCBI BioProject Name Gordonia namibiensis NBRC 108229
NCBI BioProject ID 170672
NCBI BioProject Accession PRJDB143
NCBI Locus Tag
GONAM  
NCBI BioSample Accession SAMD00041807
PI
Added By JGI automated process on 2012-07-30
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
To elucidate genomic features of the genus Gordonia, NITE decided to sequence all type strains of the genus Gordonia.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Gordonia namibiensis NBRC 108229
Organism Gordonia namibiensis NBRC 108229
Analysis Projects Gordonia namibiensis NBRC 108229
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal Level 5: Non-contiguous Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Illumina HiSeq 1000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
68  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0023124
Organism Name
Gordonia namibiensis NBRC 108229  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Gordonia  
Genus Synonyms
  
Species
Gordonia namibiensis  
Subspecies
  
Species Synonyms
  
Strain
NAM-BN063A  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 108229  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6296  
Exemplar Name
Gordonia namibiensis  
Taxon DOI
10.1601/tx.6296  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1208314
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Gordoniaceae  
NCBI Genus
Gordonia  
NCBI Species
Gordonia namibiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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