PROJECT INFORMATION
GOLD Project ID
Gp0223607  
Project Name
Mycoplasma testudineum BH29  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Mycoplasma testudineum strain:BH29 Genome sequencing
NCBI BioProject ID 394956
NCBI BioProject Accession PRJNA394956
NCBI Locus Tag
CG473  
NCBI BioSample Accession SAMN07367954
PI David Alvarez-Ponce
Added By David Alvarez-Ponce on 2017-07-19
Last Modified By Hema Katta on 2019-01-09
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Nevada, Reno
Collaborating Institute
  
Funding Agency National Institute of General Medical Sciences
Project Description
Sequencing of the type strain of Mycoplasma testudineum (BH29 = ATCC 700618)  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences High quality draft genome sequence of strain BH29, isolated from the respiratory tract of a desert tortoise.
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Mycoplasma testudineum BH29
Organism Mycoplasma testudineum ATCC 700618
Analysis Projects Mycoplasma testudineum BH29
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NextSeq 500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0088928
Organism Name
Mycoplasma testudineum ATCC 700618  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
Mycoplasma testudineum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 700618  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 700618  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8725  
Exemplar Name
Mycoplasma testudineum  
Taxon DOI
10.1601/tx.8725  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 244584
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma testudineum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Nasopharyngeal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccoid  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
0.2 um  
Cell Length
0.8 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Respiratory disease
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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