PROJECT INFORMATION
GOLD Project ID
Gp0222979  
Project Name
Weissella cibaria CMU  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Weissella cibaria CMU
NCBI BioProject ID 305559
NCBI BioProject Accession PRJNA305559
NCBI Locus Tag
AUC65  
NCBI BioSample Accession SAMN04328351
PI
Added By JGI automated process on 2017-07-13
Last Modified By JGI automated process on 2017-07-14
Project Comments
  
Project Status
Complete and Published  
Project Relevance Industrial
Sequencing Center Oradentics
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Weissella cibaria CMU  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Chonnam Med J 48(3):159-63 Comparison of Temperature and Additives Affecting the Stability of the Probiotic Weissella cibaria.
Other Publications
  
PROJECT COMPOSITION
Study Weissella cibaria CMU Genome sequencing
Organism Weissella cibaria CMU
Analysis Projects Weissella cibaria CMU
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0375752
Organism Name
Weissella cibaria CMU  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Weissella  
Genus Synonyms
  
Species
Weissella cibaria  
Subspecies
  
Species Synonyms
  
Strain
CMU  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 137591
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Weissella  
NCBI Species
Weissella cibaria  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Saliva  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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