PROJECT NAME
GOLD Project ID
Gp0193958  
Project Name
Mariprofundus micogutta ET2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome analysis of a novel iron-oxidizing Zetaproteobacteria, Maristella micogutta ET2
NCBI BioProject ID 4892
NCBI BioProject Accession PRJDB4892
NCBI Locus Tag
  
NCBI BioSample Accession SAMD00053330
PI Hiroko Makita
Added By Hiroko Makita on 2016-12-27
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Japan Agency for Marine-Earth Science and Technology (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Mariprofundus micogutta strain ET2, whole genome shotgun sequencing project  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications Archives of microbiology Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis nov.
PROJECT COMPOSITION
Study Genome analysis of a novel iron-oxidizing Zetaproteobacteria, Maristella micogutta ET2
Analysis Projects Mariprofundus micogutta ET2
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 4: Annotation Directed
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
49  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0357230
Organism Name
Mariprofundus micogutta ET2  
Other names (alias, synonyms, short names, common names)
Zetaproteobacteria bacterium ET2  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ZETA  
Genus
Mariprofundus  
Genus Synonyms
  
Species
Mariprofundus micogutta  
Subspecies
  
Species Synonyms
  
Strain
ET2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1921010
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Zetaproteobacteria  
NCBI Order
Mariprofundales  
NCBI Family
Mariprofundaceae  
NCBI Genus
Mariprofundus  
NCBI Species
Mariprofundus micogutta  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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