PROJECT INFORMATION
GOLD Project ID
Gp0187731  
Project Name
Pseudorhodobacter aquimaris KCTC 23043  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pseudorhodobacter Genome sequencing
NCBI BioProject ID 286976
NCBI BioProject Accession PRJNA286976
NCBI Locus Tag
AKU94  
NCBI BioSample Accession SAMN03785585
PI
Added By JGI automated process on 2016-12-10
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Korea Polar Research Institute (KOPRI) (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Pseudorhodobacter Genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pseudorhodobacter Genome sequencing - Korea Polar Research Institute
Organism Pseudorhodobacter aquimaris KCTC 23043
Analysis Projects Pseudorhodobacter aquimaris KCTC 23043
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0031985
Organism Name
Pseudorhodobacter aquimaris KCTC 23043  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Pseudorhodobacter  
Genus Synonyms
  
Species
Pseudorhodobacter aquimaris  
Subspecies
  
Species Synonyms
  
Strain
KCTC 23043  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KCTC 23043  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22778  
Exemplar Name
Pseudorhodobacter aquimaris  
Taxon DOI
10.1601/tx.22778  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 687412
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Pseudorhodobacter  
NCBI Species
Pseudorhodobacter aquimaris  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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