PROJECT NAME
GOLD Project ID
Gp0154126  
Project Name
Fervidobacterium riparium 1445t  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Fervidobacterium riparium strain:1445
NCBI BioProject ID 254462
NCBI BioProject Accession PRJNA254462
NCBI Locus Tag
IB67  
NCBI BioSample Accession SAMN03068912
PI Stepan Toshchakov
Added By Stepan Toshchakov on 2016-08-02
Last Modified By Supratim Mukherjee on 2016-08-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center Baltic Federal University
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Fervidobacterium riparium 1445t, a novel species of extremely thermophilic organotrophic bacterium, capable of growing on various biopolymers including starch and cellulose  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Fervidobacterium riparium 1445t
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq; IonTorrent
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0030509
Organism Name
Fervidobacterium riparium 1445t  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Fervidobacterium  
Genus Synonyms
  
Species
Fervidobacterium riparium  
Subspecies
  
Species Synonyms
  
Strain
1445t  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21630  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22696  
Exemplar Name
Fervidobacterium riparium 1445t  
Taxon DOI
10.1601/tx.22696  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 548918
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Fervidobacteriaceae  
NCBI Genus
Fervidobacterium  
NCBI Species
Fervidobacterium riparium  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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