PROJECT NAME
GOLD Project ID
Gp0150442  
Project Name
Deinococcus grandis ATCC 43672  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Deinococcus grandis ATCC43672 draft genome
NCBI BioProject ID 305386
NCBI BioProject Accession PRJDB4362
NCBI Locus Tag
DEIGR  
NCBI BioSample Accession SAMD00043215
PI
Added By JGI automated process on 2016-06-28
Last Modified By Mahrukh Mujeeb on 2017-06-16
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Japan Atomic Energy Agency
Collaborating Institute
  
Funding Agency
  
Project Description
The Deinococcus species is the best known as radioresistant bacteria. The resistance of Deinococcus species is attributed to highly proficient DNA repair capacity. Deinococcus grandis was initially isolated as a gram-negative, red-pigmented, radioresistant, rod-shaped bacterium from freshwater in Japan.  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of the Radioresistant Bacterium Deinococcus grandis, Isolated from Freshwater Fish in Japan.
Other Publications
  
PROJECT COMPOSITION
Study Deinococcus grandis ATCC43672 draft genome
Analysis Projects Deinococcus grandis ATCC 43672
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Roche GS Junior; ABI 3500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0144814
Organism Name
Deinococcus grandis ATCC 43672  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Deinococcus  
Genus Synonyms
  
Species
Deinococcus grandis  
Subspecies
  
Species Synonyms
  
Strain
ATCC 43672  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 43672  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.511  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 57498
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Deinococcales  
NCBI Family
Deinococcaceae  
NCBI Genus
Deinococcus  
NCBI Species
Deinococcus grandis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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