PROJECT INFORMATION
GOLD Project ID
Gp0144466  
Project Name
Ponticoccus marisrubri SJ5A-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Ponticoccus marisrubri SJ5A-1
NCBI BioProject ID 306724
NCBI BioProject Accession PRJNA306724
NCBI Locus Tag
AVJ23  
NCBI BioSample Accession SAMN04361754
PI
Added By JGI automated process on 2016-05-18
Last Modified By Supratim Mukherjee on 2018-01-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center King Abdulah University of Science and Technology
Red Sea Research Center, Saudi Arabia
Collaborating Institute
  
Funding Agency
  
Project Description
The strain was isolated from the Erba-brine interface of Red Sea.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Ponticoccus sp. SJ5A-1 Genome sequencing
Organism Ponticoccus marisrubri SJ5A-1
Analysis Projects Ponticoccus marisrubri SJ5A-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0139395
Organism Name
Ponticoccus marisrubri SJ5A-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Ponticoccus  
Genus Synonyms
  
Species
Ponticoccus marisrubri  
Subspecies
  
Species Synonyms
  
Strain
SJ5A-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
10.1601/ex.30946  
Exemplar Name
Ponticoccus marisrubri  
Taxon DOI
10.1601/tx.30946  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1685382
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Ponticoccus  
NCBI Species
Ponticoccus marisrubri  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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