PROJECT INFORMATION
GOLD Project ID
Gp0143893  
Project Name
Leuconostoc gelidum gasicomitatum KG16-1 LEKG1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Leuconostoc gelidum subsp. gasicomitatum KG16-1, complete genome and annotation
NCBI BioProject ID 309258
NCBI BioProject Accession PRJEB11303
NCBI Locus Tag
LEKG  
NCBI BioSample Accession SAMEA3608619
PI
Added By JGI automated process on 2016-05-18
Last Modified By Hema Katta on 2019-01-04
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center University of Helsinki (Finland)
Collaborating Institute
  
Funding Agency
  
Project Description
Leuconostoc gelidum subsp. gasicomitatum KG16-1 is a psychrotrophic spoilage lactic acid bacterium, isolated from vacuum-packaged vegetable sausages. CDSs were predicted using Prodigal and Glimmer3, and the gene functions were assigned by means of RAST and PANNZER. Predicted gene coordinates and functions were manually reviewed.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences Complete genome sequence of Leuconostoc gelidum subsp. gasicomitatum KG16-1, isolated from vacuum-packaged vegetable sausages.
Other Publications
  
PROJECT COMPOSITION
Study Leuconostoc gelidum subsp. gasicomitatum KG16-1, complete genome and annotation
Organism Leuconostoc gelidum gasicomitatum KG16-1 LEKG1
Analysis Projects Leuconostoc gelidum gasicomitatum KG16-1 LEKG1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0138836
Organism Name
Leuconostoc gelidum gasicomitatum KG16-1 LEKG1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Leuconostoc  
Genus Synonyms
  
Species
Leuconostoc gelidum  
Subspecies
gasicomitatum  
Species Synonyms
  
Strain
LEKG1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1165892
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Leuconostoc  
NCBI Species
Leuconostoc gelidum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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