PROJECT INFORMATION
GOLD Project ID
Gp0143420  
Project Name
Gemmata sp. SH-PL17  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Planctomycetales Genome sequencing and assembly
NCBI BioProject ID 277747
NCBI BioProject Accession PRJNA277747
NCBI Locus Tag
VT84  
NCBI BioSample Accession SAMN03417852
PI
Added By JGI automated process on 2016-05-18
Last Modified By Supratim Mukherjee on 2018-02-07
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Netherlands Institute of Ecology
Collaborating Institute
  
Funding Agency
  
Project Description
Planctomycetales Genome sequencing and assembly  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Planctomycetales Genome sequencing and assembly
Organism Gemmata sp. SH-PL17
Analysis Projects Gemmata sp. SH-PL17
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
PacBio Sequencing with P4-C2 chemistry  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0138375
Organism Name
Gemmata sp. SH-PL17  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Gemmata  
Genus Synonyms
  
Species
Gemmata sp. SH-PL17  
Subspecies
  
Species Synonyms
  
Strain
SH-PL17  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1630693
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Gemmataceae  
NCBI Genus
Gemmata  
NCBI Species
Gemmata sp. SH-PL17  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?