PROJECT INFORMATION
GOLD Project ID
Gp0012860  
Project Name
Teredinibacter turnerae T7902  
Other Names
  
Legacy ER Project ID
6066  
Legacy GOLD ID
Gi20177  
NCBI BioProject Name Teredinibacter turnerae T7902
NCBI BioProject ID 163003
NCBI BioProject Accession PRJNA163003
NCBI Locus Tag
YUK  
NCBI BioSample Accession SAMN02256427
PI Dan Distel
Added By Tatiparthi Reddy on 2011-11-16
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Biofuels
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Maine
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Marine microbial communities from multiple species of wood-boring bivalves (shipworm isolates).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Marine microbial communities from multiple species of wood-boring bivalves (shipworm isolates)
Organism Teredinibacter turnerae T7902
Analysis Projects Teredinibacter turnerae T7902
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012860
Organism Name
Teredinibacter turnerae T7902  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Teredinibacter  
Genus Synonyms
  
Species
Teredinibacter turnerae  
Subspecies
  
Species Synonyms
  
Strain
T7902  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2943  
Exemplar Name
Teredinibacter turnerae  
Taxon DOI
10.1601/tx.2943  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1056820
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Cellvibrionales  
NCBI Family
Cellvibrionaceae  
NCBI Genus
Teredinibacter  
NCBI Species
Teredinibacter turnerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY028398
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lyrodus pedicellatus  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Endosymbiont
Metabolisms Cellulose degrader
Dinitrogen-fixing
Phenotypes
  
Energy Sources Chemoheterotroph

 

 

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