PROJECT INFORMATION
GOLD Project ID
Gp0012768  
Project Name
Roseibacterium elongatum DSM 19469  
Other Names
  
Legacy ER Project ID
20157  
Legacy GOLD ID
Gi21384  
NCBI BioProject Name Roseibacterium elongatum DSM 19469
NCBI BioProject ID 189501
NCBI BioProject Accession PRJNA189501
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03081458
PI Hans-Peter Klenk
Added By Hans-Peter Klenk on 2011-11-18
Last Modified By Hema Katta on 2018-12-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Tree of Life
Sequencing Center LGC Genomics (Germany)
Helmholtz Centre for Infection Research (Germany)
Leibniz Institute (Germany)
Collaborating Institute
  
Funding Agency German Research Foundation (DFG) (Germany)
Project Description
Type strain of Roseibacterium elogatum DSM 19469, member of the abundant marine Roseobacter group. For taxanomical purpose.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences 9(3):840-54 Complete genome sequence of the bacteriochlorophyll a-containing Roseibacterium elongatum type strain (DSM 19469(T)), a representative of the Roseobacter group isolated from Australian coast sand.
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Ecology, Physiology and Molecular Biology of the Roseobacter clade: Towards a Systems Biology Understanding of a Globally Important Clade of Marine Bacteria
Organism Roseibacterium elongatum DSM 19469
Analysis Projects Roseibacterium elongatum DSM 19469
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
454 GS FLX Titanium
Library Method (MIGS-28)
Illumina PE, 454 PE (3kB)  
Number Of Reads
1753098  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012768
Organism Name
Roseibacterium elongatum DSM 19469  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Roseibacterium  
Genus Synonyms
  
Species
Roseibacterium elongatum  
Subspecies
  
Species Synonyms
  
Strain
OCh 323  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 19469  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9896  
Exemplar Name
Roseibacterium elongatum  
Taxon DOI
10.1601/tx.9896  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1294273
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Roseibacterium  
NCBI Species
Roseibacterium elongatum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Geologic  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 720831
Genbank 16S ID AB061273
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
27.0 - 30.0 C  
Salinity
Halophile  
pH
7.5 - 8.0 (optimum)  
Cell Diameter
  
Cell Length
1.6 - 10.0 um  
Color
Pink  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Sand
Host
Metabolisms
  
Phenotypes Nonfermentative
Non-Pathogen
Catalase positive
Energy Sources Chemoheterotroph

 

 

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