PROJECT INFORMATION
GOLD Project ID
Gp0124177  
Project Name
Algibacter alginicilyticus HZ22  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Algibacter alginolytica strain:HZ22
NCBI BioProject ID 298144
NCBI BioProject Accession PRJNA298144
NCBI Locus Tag
APS56  
NCBI BioSample Accession SAMN04156175
PI
Added By JGI automated process on 2015-11-06
Last Modified By Galina Ovchinnikova on 2017-04-07
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Zhejiang University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
To understand the degradation mechanism of Algibacter sp. HZ22  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Algibacter alginicilyticus HZ22 genome sequencing
Organism Algibacter alginicilyticus HZ22
Analysis Projects Algibacter alginicilyticus HZ22
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0118617
Organism Name
Algibacter alginicilyticus HZ22  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Algibacter  
Genus Synonyms
  
Species
Algibacter alginicilyticus  
Subspecies
  
Species Synonyms
  
Strain
HZ22  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 18496  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.29409  
Exemplar Name
Algibacter alginicilyticus  
Taxon DOI
10.1601/tx.29409  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1736674
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Algibacter  
NCBI Species
Algibacter alginicilyticus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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