PROJECT INFORMATION
GOLD Project ID
Gp0122332  
Project Name
Methylobacterium sp. ARG-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Methylobacterium sp. ARG-1
NCBI BioProject ID 291614
NCBI BioProject Accession PRJNA291614
NCBI Locus Tag
AKJ13  
NCBI BioSample Accession SAMN03939344
PI
Added By JGI automated process on 2015-10-15
Last Modified By Hema Katta on 2018-01-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Stonehill College
Collaborating Institute
  
Funding Agency
  
Project Description
This draft genome is the first example of a Methylobacterium species isolated from Armillaria gallica. Analysis of this genome may provide information on how and why these two organisms associate with one another.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of Methylobacterium sp. Strain ARG-1 Isolated from the White-Rot Fungus Armillaria gallica.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Methylobacterium sp. ARG-1 genome sequencing
Organism Methylobacterium sp. ARG-1
Analysis Projects Methylobacterium sp. ARG-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0117395
Organism Name
Methylobacterium sp. ARG-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylobacterium  
Genus Synonyms
  
Species
Methylobacterium sp. ARG-1  
Subspecies
  
Species Synonyms
  
Strain
ARG-1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1692501
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Methylobacteriaceae  
NCBI Genus
Methylobacterium  
NCBI Species
Methylobacterium sp. ARG-1  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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