PROJECT INFORMATION
GOLD Project ID
Gp0121028  
Project Name
Clostridium cylindrosporum DSM 605  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Clostridium cylindrosporum DSM 605
NCBI BioProject ID 288090
NCBI BioProject Accession PRJNA288090
NCBI Locus Tag
CLCY  
NCBI BioSample Accession SAMN03794733
PI
Added By JGI automated process on 2015-09-09
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Model Organism
Sequencing Center Goettingen Genomics Laboratory (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Clostridium cylindrosporum HC1, a purine- and glycine-fermenting anaerobe, which is using the selenocystein-containing glycine reductase for substrate degradation.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Clostridium cylindrosporum DSM 605 genome sequencing
Organism Clostridium cylindrosporum DSM 605
Analysis Projects Clostridium cylindrosporum DSM 605
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013545
Organism Name
Clostridium cylindrosporum DSM 605  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium cylindrosporum  
Subspecies
  
Species Synonyms
  
Strain
DSM 605  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 605  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3923  
Exemplar Name
Clostridium cylindrosporum  
Taxon DOI
10.1601/tx.3923  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121307
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium cylindrosporum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID Y18179
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
40-45  
Salinity
  
pH
6.7-8.5  
Cell Diameter
0.8 um  
Cell Length
3.3 um  
Color
White  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Mud
Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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