PROJECT NAME
GOLD Project ID
Gp0119397  
Project Name
Chloroflexus sp. MS-G_MiSeq  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of hot spring microbial mat isolates from Yellowstone National Park, WY, USA
NCBI BioProject ID 236114
NCBI BioProject Accession PRJNA236114
NCBI Locus Tag
JE47  
NCBI BioSample Accession SAMN02905655
PI Vera Thiel
Added By Vera Thiel on 2015-07-16
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
none  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Pennsylvania State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Genomes of Yellowstone hot spring microbial mat isolates  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of the Deinococcus-Thermus Bacterium Meiothermus ruber Strain A.
Other Publications
  
PROJECT COMPOSITION
Study YNP hot spring microbial mat reference genomes
Analysis Projects Chloroflexus sp. MS-G_MiSeq
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
Illumina Regular Fragement, 480pb  
Number Of Reads
2,715,946 paired-end  
Read Size
301bp  
Vector
no vector  
GC Percent
54  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0114838
Organism Name
Chloroflexus sp. MS-G  
Other names (alias, synonyms, short names, common names)
YNP-MS  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROFLEXI  
Genus
Chloroflexus  
Genus Synonyms
  
Species
Chloroflexus sp. MS-G  
Subspecies
  
Species Synonyms
  
Strain
MS-G  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1521187
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chloroflexi  
NCBI Class
Chloroflexia  
NCBI Order
Chloroflexales  
NCBI Family
Chloroflexaceae  
NCBI Genus
Chloroflexus  
NCBI Species
Chloroflexus sp. MS-G  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Hot (42-90C)  
Specific Ecosystem
Alkaline  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
50-68C  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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