PROJECT INFORMATION
GOLD Project ID
Gp0117697  
Project Name
Dokdonia donghaensis DSW-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Dokdonia donghaensis DSW-1
NCBI BioProject ID 264465
NCBI BioProject Accession PRJNA264465
NCBI Locus Tag
NV36  
NCBI BioSample Accession SAMN03135132
PI
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of La Laguna
Collaborating Institute
  
Funding Agency
  
Project Description
Draft genome sequence of the proteorhodopsin-containing marine organism Dokdonia donghaensis strain DSW-1, DSM 17200.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Dokdonia donghaensis DSW-1 Genome sequencing
Organism Dokdonia donghaensis DSW-1
Analysis Projects Dokdonia donghaensis DSW-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0037387
Organism Name
Dokdonia donghaensis DSW-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Dokdonia  
Genus Synonyms
  
Species
Dokdonia donghaensis  
Subspecies
  
Species Synonyms
  
Strain
DSW-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17200  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9753  
Exemplar Name
Dokdonia donghaensis DSM 17200  
Taxon DOI
10.1601/tx.9753  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1300343
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Dokdonia  
NCBI Species
Dokdonia donghaensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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