PROJECT INFORMATION
GOLD Project ID
Gp0117392  
Project Name
Bacillus amyloliquefaciens plantarum AP183  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacillus amyloliquefaciens subsp. plantarum
NCBI BioProject ID 270954
NCBI BioProject Accession PRJNA270954
NCBI Locus Tag
RZ52  
NCBI BioSample Accession SAMN03271888
PI
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2017-11-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center Auburn University
Collaborating Institute
  
Funding Agency
  
Project Description
Whole genome sequencing of Bacillus amyloliquefaciens subsp. plantarum AP183  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of Bacillus amyloliquefaciens AP183 with Antibacterial Activity against Methicillin-Resistant Staphylococcus aureus.
Other Publications
  
PROJECT COMPOSITION
Study Bacillus amyloliquefaciens plantarum strain:AP183 Genome sequencing
Organism Bacillus amyloliquefaciens plantarum AP183
Analysis Projects Bacillus amyloliquefaciens plantarum AP183
Bacillus amyloliquefaciens plantarum AP183 GCA_000875875.1
Number of Analysis Projects 2
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0113736
Organism Name
Bacillus amyloliquefaciens plantarum AP183  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Bacillus  
Genus Synonyms
  
Species
Bacillus amyloliquefaciens  
Subspecies
  
Species Synonyms
  
Strain
AP183  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 492670
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus velezensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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