PROJECT NAME
GOLD Project ID
Gp0011539  
Project Name
Nitrosopumilus sp. AR  
Other Names
  
Legacy ER Project ID
5378  
Legacy GOLD ID
Gi10248  
NCBI BioProject Name Nitrosopumilus sp. AR
NCBI BioProject ID 66411
NCBI BioProject Accession PRJNA66411
NCBI Locus Tag
NAR  
NCBI BioSample Accession SAMN02469592
PI
Added By JGI automated process on 2011-07-14
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Chungbuk National University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Nitrosopumilus sp. AR genome sequencing  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Nitrosopumilus sp. AR
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011539
Organism Name
Nitrosopumilus sp. AR  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
THAUMARCHAEOTA  
Genus
Nitrosopumilus  
Genus Synonyms
  
Species
Nitrosopumilus sp. AR  
Subspecies
  
Species Synonyms
  
Strain
AR  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1027373
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Thaumarchaeota  
NCBI Class
  
NCBI Order
Nitrosopumilales  
NCBI Family
Nitrosopumilaceae  
NCBI Genus
Nitrosopumilus  
NCBI Species
Nitrosopumilus sp. AR  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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