PROJECT NAME
GOLD Project ID
Gp0115297  
Project Name
Thermosipho melanesiensis 434  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Thermotogales isolates from hydrothermal vents
NCBI BioProject ID 231770
NCBI BioProject Accession PRJNA231770
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03284850
PI Thomas Haverkamp
Added By Thomas Haverkamp on 2015-05-25
Last Modified By Supratim Mukherjee on 2016-01-18
Project Comments
Genome sequencing of Thermotogales isolates from hydrothermal vents  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Norwegian Sequencing Centre (NSC) (Norway)
Collaborating Institute
  
Funding Agency
  
Project Description
Biogeographic and population analyses of Thermotogales bacteria from hydrocarbon-rich environments  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing of Thermotogales isolates from hydrothermal vents
Analysis Projects Thermosipho melanesiensis 434
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
250  
Vector
  
GC Percent
33  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0112856
Organism Name
Thermosipho melanesiensis 434  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Thermosipho  
Genus Synonyms
  
Species
Thermosipho melanesiensis  
Subspecies
  
Species Synonyms
  
Strain
434  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 46541
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Fervidobacteriaceae  
NCBI Genus
Thermosipho  
NCBI Species
Thermosipho melanesiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Diffuse flow  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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