PROJECT INFORMATION
GOLD Project ID
Gp0106153  
Project Name
Elizabethkingia miricola ATCC 33958  
Other Names
  
Legacy ER Project ID
78500  
Legacy GOLD ID
Gi0078500  
NCBI BioProject Name Elizabethkingia miricola strain:ATCC 33958
NCBI BioProject ID 259681
NCBI BioProject Accession PRJNA259681
NCBI Locus Tag
KS04  
NCBI BioSample Accession SAMN02989770
PI
Added By JGI automated process on 2014-09-22
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Oklahoma State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Elizabethkingia miricola is an opportunistic pathogen with a non-specific taxon designation. See: Kim KK et al. 2005. Transfer of Chyrseobacterium meningosepticum and Chryseobacterium miricola to Elizabethkingia gen. nov. as Elizabethkingia meningoseptica comb. nov. and Elizabethkingia miricola comb. nov. Int. J. Sys. Evol. Microbiol. 55:1287-1293. This study uses whole genome phylogeny to define Elizabethkingia miricola as distinct from E. meningoseptica, and E. anophelis.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX689014
Experiment Title Draft Genome Sequencing of E. miricola ATCC 33958
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name IP71RFC01
Library Layout SINGLE
Library Instrument 454 GS Junior
Spot Length 0
PROJECT COMPOSITION
Study Elizabethkingia miricola draft genome sequencing
Organism Elizabethkingia miricola ATCC 33958
Analysis Projects Elizabethkingia miricola ATCC 33958
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0106153
Organism Name
Elizabethkingia miricola ATCC 33958  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Elizabethkingia  
Genus Synonyms
  
Species
Elizabethkingia miricola  
Subspecies
  
Species Synonyms
  
Strain
ATCC 33958  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 33958  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 172045
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Elizabethkingia  
NCBI Species
Elizabethkingia miricola  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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