PROJECT INFORMATION
GOLD Project ID
Gp0010492  
Project Name
Rhodopirellula baltica SWK14  
Other Names
  
Legacy ER Project ID
19161  
Legacy GOLD ID
Gi09151  
NCBI BioProject Name Rhodopirellula baltica SWK14
NCBI BioProject ID 63491
NCBI BioProject Accession PRJNA63491
NCBI Locus Tag
RBSWK14  
NCBI BioSample Accession SAMN02261084
PI
Added By Ionna Pagani on 2011-03-08
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Biotechnological
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
This organism is a pear-shaped bacterium having a life cycle consisting of an aggregate-forming sessile (non-motile) form and a motile swarmer cell. They have a pirellulosome, a large nucleoid-containing cellular compartment, which is surrounded by a single membrane. Rhodopirellula baltica strain SWK14 has been isolated from algae surface near Tj¿rn¿, Sweden and will be used for comparative genome analysis.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications 23273849
Other Publications
  
PROJECT COMPOSITION
Study Rhodopirellula genome sequencing - Max Planck Institute for Marine Microbiology
Organism Rhodopirellula baltica SWK14
Analysis Projects Rhodopirellula baltica SWK14
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010492
Organism Name
Rhodopirellula baltica SWK14  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Rhodopirellula  
Genus Synonyms
Pirellula  
Species
Rhodopirellula baltica  
Subspecies
  
Species Synonyms
  
Strain
SWK14  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 993516
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Planctomycetaceae  
NCBI Genus
Rhodopirellula  
NCBI Species
Rhodopirellula baltica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Algae  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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