PROJECT INFORMATION
GOLD Project ID
Gp0010213  
Project Name
Salmonella enterica enterica sv. Montevideo 609460  
Other Names
  
Legacy ER Project ID
19057  
Legacy GOLD ID
Gi08956  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Montevideo str. 609460
NCBI BioProject ID 50021
NCBI BioProject Accession PRJNA50021
NCBI Locus Tag
SEEM460  
NCBI BioSample Accession SAMN00710607
PI
Added By Ionna Pagani on 2011-02-11
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Human Pathogen
Medical
Sequencing Center U.S. Food and Drug Administration (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Salmonella enterica is a major cause of gastrointestinal illness and foodborne disease. This strain is being sequenced for comparative purposes.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications The New England journal of medicine 364(10):981-2 Identification of a salmonellosis outbreak by means of molecular sequencing.
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX101666
Experiment Title Whole genome sequencing of Salmonella Montevideo str. 609460 by 454 GS FLX
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Salmonella Montevideo str. 609460 shotgun
Library Layout SINGLE
Library Instrument 454 GS FLX Titanium
Spot Length 800
PROJECT COMPOSITION
Study Salmonella enterica enterica sv Montevideo 609460
Organism Salmonella enterica enterica sv. Montevideo 609460
Analysis Projects Salmonella enterica enterica sv. Montevideo 609460
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0010213
Organism Name
Salmonella enterica enterica sv. Montevideo 609460  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
Salmonella enterica  
Subspecies
enterica  
Species Synonyms
  
Strain
609460  
Strain Synonyms
  
Serovar/Cultivar
Montevideo  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 859198
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases Gastroenteritis
Salmonellosis
Food poisoning
Known Habitats Soil
Host
Food
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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