PROJECT INFORMATION
GOLD Project ID
Gp0101041  
Project Name
Psychroserpens mesophilus JCM 13413  
Other Names
  
Legacy ER Project ID
76456  
Legacy GOLD ID
Gi0076456  
NCBI BioProject Name Psychroserpens mesophilus strain:JCM 13413
NCBI BioProject ID 255843
NCBI BioProject Accession PRJNA255843
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03160575
PI
Added By JGI automated process on 2014-07-25
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Korea Polar Research Institute (KOPRI) (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
To analyze the genomic relatedness by calculating the ANI and genome-to-genome distance  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Psychroserpens Genome sequencing - Korea Polar Research Institute
Organism Psychroserpens mesophilus JCM 13413
Analysis Projects Psychroserpens mesophilus JCM 13413
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026136
Organism Name
Psychroserpens mesophilus JCM 13413  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Psychroserpens  
Genus Synonyms
  
Species
Psychroserpens mesophilus  
Subspecies
  
Species Synonyms
  
Strain
JCM 13413  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
JCM 13413  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10062  
Exemplar Name
Psychroserpens mesophilus  
Taxon DOI
10.1601/tx.10062  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 325473
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Psychroserpens  
NCBI Species
Psychroserpens mesophilus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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