ORGANISM INFORMATION
GOLD Organism ID Go0013127
Organism Name Perlucidibaca piscinae DSM 21586
Other Names
Common Name
Domain BACTERIAL
Genus Perlucidibaca
Genus Synonyms
Species Perlucidibaca piscinae
Species Synonyms
Strain DSM 21586
Subspecies
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar
Phylum PROTEOBACTERIA-GAMMA
NCBI Taxonomy ID
1122951  Source is NCBI's Taxonomy
Type Strain Yes
Culture Collection ID DSM 21586
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level
Taxon DOI 10.1601/tx.13754
Exemplar DOI 10.1601/ex.13754
Exemplar Name Perlucidibaca piscinae
Genbank 16S ID DQ664237
Is Public Yes
Related Sequencing Projects 1
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Taxonomy Name Perlucidibaca piscinae DSM 21586
NCBI Tax ID
1122951  Source is NCBI's Taxonomy
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Pseudomonadota
NCBI Class Gammaproteobacteria
NCBI Order Pseudomonadales
NCBI Family Perlucidibacaceae
NCBI Genus Perlucidibaca
NCBI Species Perlucidibaca piscinae
   
ORGANISM METADATA
Cell Diameter 0.5-0.7 um
Cell Shape Rod-shaped
Color
Gram Stain Gram-
Motility Motile
Oxygen Requirement (MIGS-22) Facultative
pH Range is 6 to 10
Salinity (MIGS-6.3)
Pressure
Sporulation
Carbon Source
Growth Temperature
30
Celsius.
Cell Length 0.7-1.2 um
Commercial Strain
Commercial Strain Comments
Cell Arrangements
Diseases (MIGS-15)
Habitats (MIGS-6) Aquatic
Fresh water
Metabolism Nitrate reducer
Phenotypes Catalase negative
Energy Sources Chemoheterotroph
Biotic Relationships (MIGS-14)
Propagation
   
ORGANISM ISOLATION
Sample Collection Date (MIGS-5) 5/9/2012
Sample Isolation Publication International Journal of Systematic and Evolutionary Microbiology: 58(Pt 1):97-102 Perlucidibaca piscinae gen. nov., sp. nov., a freshwater bacterium belonging to the family Moraxellaceae.
PubMed: 18175691 DOI: 10.1099/ijs.0.65039-0
Please enter a PubMed Id or delete an existing PubMed ID to remove the publication
PubMed Id
Sample Collection Site (MIGS-13) Artificial freshwater pond
Isolation Country/Ocean South Korea
Sample Isolation Comments
Collection Method
Contact Name Nikos Kyrpides
Contact Email [email protected]
   
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Pond
Specific Ecosystem Unclassified
Ecosystem Path Id 4380
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Inha University
Latitude (MIGS-4.1) 37.451
Longitude (MIGS-4.2) 126.6531
LatLong Information Inferred
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
28
Celsius.
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate