ORGANISM INFORMATION | |
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GOLD Organism ID |
Go0003484 |
Organism Name
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Archaeoglobus profundus Av18, DSM 5631 |
Other Names |
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Common Name |
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Domain |
ARCHAEAL |
Genus
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Archaeoglobus |
Genus Synonyms |
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Species
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Archaeoglobus profundus |
Species Synonyms |
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Strain |
Av18, DSM 5631 |
Subspecies |
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Phylogenetic Markers
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Taxonomy Classification Method
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Serovar/Cultivar |
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Phylum |
EURYARCHAEOTA-ARCHAEOGLOBI |
NCBI Taxonomy ID
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572546 |
Type Strain |
Yes |
Culture Collection ID |
DSM 5631 |
Organism Type |
Natural |
Cultured |
Yes |
Culture Type |
Isolate |
Comments |
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Biosafety Level |
1 |
Taxon DOI
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10.1601/tx.408 |
Exemplar DOI
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10.1601/ex.408 |
Exemplar Name
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Archaeoglobus profundus |
Genbank 16S ID |
AJ299219:{1-1500} |
Is Public |
Yes |
Related Sequencing Projects |
1 |
Related Analysis Projects |
1 |
NCBI TAXONOMY | |
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NCBI Organism Name |
Archaeoglobus profundus DSM 5631 |
NCBI Tax ID
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572546 |
NCBI Superkingdom |
Archaea |
NCBI Kingdom |
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NCBI Phylum |
Euryarchaeota |
NCBI Class |
Archaeoglobi |
NCBI Order |
Archaeoglobales |
NCBI Family |
Archaeoglobaceae |
NCBI Genus |
Archaeoglobus |
NCBI Species |
Archaeoglobus profundus |
ORGANISM METADATA | |
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Cell Diameter |
1.3 um |
Cell Shape |
Coccus-shaped |
Color |
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Gram Stain |
Gram- |
Motility |
Nonmotile |
Oxygen Requirement (MIGS-22) |
Anaerobe |
pH | Range is 4.6 to 7.5 |
Salinity (MIGS-6.3) |
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Pressure |
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Sporulation |
Nonsporulating |
Carbon Source
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Growth Temperature |
82 Celcius.
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Cell Length |
1.4 um |
Commercial Strain |
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Commercial Strain Comments |
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Cell Arrangements |
Singles Pairs |
Diseases (MIGS-15) |
None |
Habitats (MIGS-6) |
Marine Aquatic Deep sea |
Metabolism |
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Phenotypes |
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Energy Sources |
Chemolithoautotroph |
Biotic Relationships (MIGS-14) |
Free living |
Propagation
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ORGANISM ISOLATION | |
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Collection Date
(MIGS-5)
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Sample Isolation Publication
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Sample Collection Site
(MIGS-13)
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Deep sea hydrothermal vents; Mexico, Gulf of California, Guaymas Basin |
Isolation Country |
Mexico |
Sample Isolation Comments |
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Collection Method
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Contact Name
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Jonathan Eisen |
Contact Email
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jaeisen@ucdavis.edu |
ECOSYSTEM CLASSIFICATION
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Ecosystem |
Environmental |
Ecosystem Category |
Aquatic |
Ecosystem Type |
Marine |
Ecosystem Subtype |
Hydrothermal vents |
Specific Ecosystem |
Unclassified |
Ecosystem Path Id |
4027 |
ENVIRONMENTAL INFORMATION | |
Geographic Location
(MIGS-4)
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Deep sea hydrothermal vents; Mexico, Gulf of California, Guaymas Basin |
Lat/Long Lookup |
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Latitude
(MIGS-4.1)
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27.87 |
Longitude
(MIGS-4.2)
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-110.81 |
LatLong Information
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Inferred |
Geographical Map | |
Broad-scale environmental context (MIxS:0000012) |
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Local environmental context (MIxS:0000013) |
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Environmental medium (MIxS:0000014) |
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Altitude (MIGS-4.4) |
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Elevation |
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Depth (MIGS-4.3) |
2000 Meters.
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Subsurface Depth |
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Temperature Range |
Hyperthermophile |
Sample Collection Temperature |
85 Celcius.
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Chlorophyll Concentration |
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Nitrate Concentration |
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Oxygen Concentration |
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Salinity Concentration |
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Methane Concentration (mmol) |
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Sample Conductivity
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Growth Conditions |
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Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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ProPortal Ocean |
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ProPortal Isolation |
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ProPortal Station |
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ProPortal WOA Temperature |
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ProPortal WOA Salinty |
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ProPortal WOA Oxygen |
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ProPortal WOA Silicate |
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ProPortal WOA Phosphate |
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ProPortal WOA Nitrate |
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