ORGANISM INFORMATION
GOLD Organism ID Go0000184
Organism Name Bacteroides sp. D1
Other Names
Common Name
NCBI Taxonomy ID 556258
Domain BACTERIAL
Phylum BACTEROIDETES
Genus Bacteroides
Genus Synonyms
Species Bacteroides sp. D1
Species Synonyms
Subspecies
Serovar
Strain D1
Type Strain Unknown
Culture Collection BEI HM-74
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level
Strain Info ID
Taxon DOI
Exemplar DOI
Exemplar Name
Genbank 16S ID
Is Public Yes
Last Modified By Tatiparthi Reddy on 2017-03-14
Related Sequencing Projects 1
Related Analysis Projects 1
NCBI TAXONOMY
NCBI Organism Name Bacteroides sp. D1
NCBI Tax ID 556258
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Bacteroidetes
NCBI Class Bacteroidia
NCBI Order Bacteroidales
NCBI Family Bacteroidaceae
NCBI Genus Bacteroides
NCBI Species Bacteroides sp. D1
ORGANISM METADATA
Cell Diameter
Cell Shape Rod-shaped
Color
Gram Stain Gram-
Motility Nonmotile
Oxygen Requirement (MIGS-22) Anaerobe
pH
Salinity (MIGS-6.3)
Pressure
Sporulation Nonsporulating
Carbon Source
Biotic Relationships (MIGS-14) Free living
Temperature Optimum
Temperature Range Mesophile
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements
Diseases (MIGS-15)
Habitats (MIGS-6) Host
Human fecal
Human intestinal microflora
Metabolism
Phenotypes
Energy Sources Heterotroph
Body Products Feces
COLLECTION DATE
Collection Date (MIGS-5)
ORGANISM ISOLATION
Sample Isolation Publication
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Sample Collection Site (MIGS-13) Human fecal sample
Isolation Country
Sample Isolation Comments
Sample Collection Method
Contact Name Birren B
Contact Email bwb@broad.mit.edu
HOST METADATA
Isolation Host Name Homo sapiens
Host Taxonomy ID 9606
Host Gender
Host Race
Host Age
Host Health Condition
Patient Visit Number
Host Medication
Medical Record Number
Host Body Site Gastrointestinal tract
Host Body Subsite
Host Body Product Feces
Host Specificity or Range
Host Comments
GOLD CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Human
Ecosystem Type Digestive system
Ecosystem Subtype Large intestine
Specific Ecosystem Fecal
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4)
Latitude (MIGS-4.1)
Longitude (MIGS-4.2)
Geographical Map No mapping data available.
LatLong Information
Altitude (MIGS-4.4)
Depth (MIGS-4.3)
Sample Collection Temperature
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Growth Conditions
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate