Studies
|
56,335 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,361 |
|
Analysis Projects
|
384,993 |
| Organisms | 484,222 |
| ORGANISM INFORMATION | |||||
|---|---|---|---|---|---|
| GOLD Organism ID |
Go0667042 |
||||
|
Organism Name
|
Populus tremuloides POTR-SJNF-M-D-141 |
||||
| Other Names |
|
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| Common Name |
|
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| Domain |
EUKARYAL |
||||
|
Genus
|
Populus |
||||
| Genus Synonyms |
|
||||
|
Species
|
Populus tremuloides |
||||
| Species Synonyms |
|
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| Strain |
|
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| Subspecies |
|
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|
Phylogenetic Markers
|
|
||||
|
Taxonomy Classification Method
|
|
||||
| Serovar/Cultivar |
POTR-SJNF-M-D-141 |
||||
| Phylum |
PLANTS-STREPTOPHYTA |
||||
|
NCBI Taxonomy ID
|
|
||||
| Type Strain |
|
||||
| Culture Collection ID |
|
||||
| Organism Type |
Natural |
||||
| Cultured |
Yes |
||||
| Culture Type |
Isolate |
||||
| Comments |
|
||||
| Biosafety Level |
|
||||
|
Taxon DOI
|
|
||||
|
Exemplar DOI
|
|
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|
Exemplar Name
|
|
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| Genbank 16S ID |
|
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| Is Public |
Yes |
||||
| Related Sequencing Projects |
1 |
||||
| Related Analysis Projects |
|
||||
| NCBI TAXONOMY | |||||
|---|---|---|---|---|---|
| NCBI Taxonomy Name |
Populus tremuloides |
||||
|
NCBI Tax ID
|
|
||||
| NCBI Superkingdom |
Eukaryota |
||||
| NCBI Kingdom |
Viridiplantae |
||||
| NCBI Phylum |
Streptophyta |
||||
| NCBI Class |
Magnoliopsida |
||||
| NCBI Order |
Malpighiales |
||||
| NCBI Family |
Salicaceae |
||||
| NCBI Genus |
Populus |
||||
| NCBI Species |
Populus tremuloides |
||||
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
|
| Cell Shape |
|
| Color |
|
| Gram Stain |
|
| Motility |
|
| Oxygen Requirement (MIGS-22) |
|
| pH |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| Sporulation |
|
|
Carbon Source
|
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| Growth Temperature |
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| Cell Length |
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| Commercial Strain |
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| Commercial Strain Comments |
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| Cell Arrangements |
|
| Diseases (MIGS-15) |
|
| Habitats (MIGS-6) |
|
| Metabolism |
|
| Phenotypes |
|
| Energy Sources |
|
| Biotic Relationships (MIGS-14) |
|
|
Propagation
|
|
| ORGANISM ISOLATION | |
|---|---|
|
Sample Collection Date
(MIGS-5)
|
6/28/2018
|
|
Sample Isolation Publication
|
|
|
Sample Collection Site
(MIGS-13)
|
leaves dried on silica gel beads |
| Isolation Country/Ocean |
USA |
| Sample Isolation Comments |
|
|
Collection Method
|
|
|
Contact Name
|
|
|
Contact Email
|
|
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
|
| Ecosystem Category |
|
| Ecosystem Type |
|
| Ecosystem Subtype |
|
| Specific Ecosystem |
|
| Ecosystem Path Id |
1 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
USA: California |
|
Latitude
(MIGS-4.1)
|
37.4819 |
|
Longitude
(MIGS-4.2)
|
-108.192 |
|
LatLong Information
|
|
| Geographical Map | |
| Broad-scale Environmental Context (MIxS:0000012) |
|
| Local Environmental Context (MIxS:0000013) |
|
| Environmental Medium (MIxS:0000014) |
|
| Altitude (MIGS-4.4) |
|
| Elevation | Range is to 2887 Meters. |
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
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| Temperature Range |
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| Sample Collection Temperature |
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| Chlorophyll Concentration |
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| Nitrate Concentration |
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| Oxygen Concentration |
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| Salinity Concentration |
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| Methane Concentration (mmol) |
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|
Sample Conductivity
|
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| Growth Conditions |
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| Bicarbonate Concentration (mM) |
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| Soluble Iron Concentration (uM) |
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| Hydrogen Sulfide Concentration (mM) |
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| Hydrogen Sulfide Presence |
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| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
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| ProPortal WOA Oxygen |
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| ProPortal WOA Silicate |
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| ProPortal WOA Phosphate |
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| ProPortal WOA Nitrate |
|
