ORGANISM INFORMATION
GOLD Organism ID Go0621639
Organism Name Ancylobacter sonchi VKM B-3145
Other Names
Common Name
Domain BACTERIAL
Genus Ancylobacter
Genus Synonyms
Species Ancylobacter sonchi
Species Synonyms
Strain VKM B-3145
Subspecies
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar
Phylum PROTEOBACTERIA-ALPHA
NCBI Taxonomy ID
1937790  Source is NCBI's Taxonomy
Type Strain Yes
Culture Collection ID VKM B-3145
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level
Taxon DOI
Exemplar DOI
Exemplar Name
Genbank 16S ID KY492736
Is Public Yes
Related Sequencing Projects 1
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Taxonomy Name Ancylobacter sonchi
NCBI Tax ID
1937790  Source is NCBI's Taxonomy
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Pseudomonadota
NCBI Class Alphaproteobacteria
NCBI Order Hyphomicrobiales
NCBI Family Xanthobacteraceae
NCBI Genus Ancylobacter
NCBI Species Ancylobacter sonchi
   
ORGANISM METADATA
Cell Diameter
Cell Shape
Color
Gram Stain
Motility
Oxygen Requirement (MIGS-22)
pH
Salinity (MIGS-6.3)
Pressure
Sporulation
Carbon Source
Growth Temperature
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements
Diseases (MIGS-15)
Habitats (MIGS-6)
Metabolism
Phenotypes
Energy Sources
Body Products
Biotic Relationships (MIGS-14)
Propagation
   
ORGANISM ISOLATION
Sample Collection Date (MIGS-5)
Sample Isolation Publication

Please enter a PubMed Id or delete an existing PubMed ID to remove the publication
PubMed Id
Sample Collection Site (MIGS-13) root of field sow thistle (Sonchus arvensis L.)
Isolation Country/Ocean Russia
Sample Isolation Comments
Collection Method
Contact Name
Contact Email
   
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Plants
Ecosystem Type Roots
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
Ecosystem Path Id 4466
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4)
Latitude (MIGS-4.1)
Longitude (MIGS-4.2)
LatLong Information
Geographical Map No mapping data available.
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
28
Celsius.
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions DSM Media # 830 at a temperature of 28C
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate
   
HOST METADATA
Isolation Host Name
Host Taxonomy ID
Host Gender
Host Race
Host Age
Host Health Condition
Health Disease Status
Patient Visit Number
Host Medication
Medical Record Number
Host Body Site
Host Body Subsite
Host Body Product
Host Specificity or Range
Host Comments