Studies
|
47,510 |
|
Biosamples
|
122,152 |
|
Sequencing Projects
|
392,066 |
|
Analysis Projects
|
311,720 |
| Organisms | 403,834 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0545247 |
|
Organism Name
|
Bacillus caeni HB172195 |
| Other Names |
|
| Common Name |
|
| Domain |
BACTERIAL |
|
Genus
|
Bacillus |
| Genus Synonyms |
|
|
Species
|
Bacillus caeni |
| Species Synonyms |
|
| Strain |
HB172195 |
| Subspecies |
|
|
Phylogenetic Markers
|
|
|
Taxonomy Classification Method
|
|
| Serovar/Cultivar |
|
| Phylum |
FIRMICUTES |
|
NCBI Taxonomy ID
|
2574798 |
| Type Strain |
Yes |
| Culture Collection ID |
CGMCC 1.16730 |
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
|
|
Taxon DOI
|
|
|
Exemplar DOI
|
|
|
Exemplar Name
|
|
| Genbank 16S ID |
MK249707 |
| Is Public |
Yes |
| Related Sequencing Projects |
1 |
| Related Analysis Projects |
1 |
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Bacillus caeni |
|
NCBI Tax ID
|
2574798 |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
| NCBI Phylum |
Firmicutes |
| NCBI Class |
Bacilli |
| NCBI Order |
Bacillales |
| NCBI Family |
Bacillaceae |
| NCBI Genus |
Bacillus |
| NCBI Species |
Bacillus caeni |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
0.4–0.6 µm |
| Cell Shape |
Rod-shaped |
| Color |
Yellow |
| Gram Stain |
|
| Motility |
Motile |
| Oxygen Requirement (MIGS-22) |
Aerobe |
| pH | Range is 5 to 9 |
| Salinity (MIGS-6.3) |
Halophile |
| Pressure |
|
| Sporulation |
|
|
Carbon Source
|
d-Fructose, lactose and maltose |
| Growth Temperature | Range is 15 to 50 Celcius. |
| Cell Length |
1.8–4.0 µm |
| Commercial Strain |
|
| Commercial Strain Comments |
|
| Cell Arrangements |
|
| Diseases (MIGS-15) |
|
| Habitats (MIGS-6) |
Mangrove soil |
| Metabolism |
|
| Phenotypes |
|
| Energy Sources |
|
| Biotic Relationships (MIGS-14) |
|
|
Propagation
|
|
| ORGANISM ISOLATION | |
|---|---|
|
Collection Date
(MIGS-5)
|
7/7/2017 |
|
Sample Isolation Publication
|
International Journal of Systematic and Evolutionary Microbiology
70(3):1503-1507
sp. nov., isolated from mangrove sediment.
|
|
Sample Collection Site
(MIGS-13)
|
mangrove sediment |
| Isolation Country |
China |
| Sample Isolation Comments |
|
|
Collection Method
|
dissolved in 90 ml sterile sea water |
|
Contact Name
|
Yonghua Hu |
|
Contact Email
|
huyonghua@itbb.org.cn |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
Environmental |
| Ecosystem Category |
Terrestrial |
| Ecosystem Type |
Soil |
| Ecosystem Subtype |
Unclassified |
| Specific Ecosystem |
Unclassified |
| Ecosystem Path Id |
4212 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
China: Wenchang |
| Lat/Long Lookup |
|
|
Latitude
(MIGS-4.1)
|
19.618 |
|
Longitude
(MIGS-4.2)
|
110.8 |
|
LatLong Information
|
Verified |
| Geographical Map | |
| Broad-scale environmental context (MIxS:0000012) |
|
| Local environmental context (MIxS:0000013) |
|
| Environmental medium (MIxS:0000014) |
|
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Temperature Range |
|
| Sample Collection Temperature |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Growth Conditions |
|
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
