Studies
|
45,281 |
|
Biosamples
|
100,995 |
|
Sequencing Projects
|
354,227 |
|
Analysis Projects
|
282,436 |
| Organisms | 386,521 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0509591 |
|
Organism Name
|
Sorghum bicolor PI_455301 |
| Other Names |
|
| Common Name |
|
|
NCBI Taxonomy ID
|
4558 |
| Domain |
EUKARYAL |
| Phylum |
PLANTS-STREPTOPHYTA |
|
Genus
|
Sorghum |
| Genus Synonyms |
|
|
Species
|
Sorghum bicolor |
| Species Synonyms |
|
| Serovar/Cultivar |
PI_455301 |
| Strain |
|
| Subspecies |
|
| Type Strain |
|
| Culture Collection ID |
|
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
|
|
Taxon DOI
|
|
|
Exemplar DOI
|
|
|
Exemplar Name
|
|
| Genbank 16S ID |
|
| Is Public |
Yes |
| Related Sequencing Projects |
1 |
| Related Analysis Projects |
|
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Sorghum bicolor |
|
NCBI Tax ID
|
4558 |
| NCBI Superkingdom |
Eukaryota |
| NCBI Kingdom |
Viridiplantae |
| NCBI Phylum |
Streptophyta |
| NCBI Class |
Magnoliopsida |
| NCBI Order |
Poales |
| NCBI Family |
Poaceae |
| NCBI Genus |
Sorghum |
| NCBI Species |
Sorghum bicolor |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
|
| Cell Shape |
|
| Color |
|
| Gram Stain |
|
| Motility |
|
| Oxygen Requirement (MIGS-22) |
|
| pH |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| Sporulation |
|
|
Carbon Source
|
|
| Biotic Relationships (MIGS-14) |
|
| Temperature Range |
|
| Growth Temperature |
|
| Cell Length |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
| Cell Arrangements |
|
| Diseases (MIGS-15) |
|
| Habitats (MIGS-6) |
|
| Metabolism |
|
| Phenotypes |
|
| Energy Sources |
|
| COLLECTION DATE | |
|---|---|
|
Collection Date
(MIGS-5)
|
7/13/2017 |
| ORGANISM ISOLATION | |
|
Sample Isolation Publication
|
|
|
Sample Collection Site
(MIGS-13)
|
|
| Isolation Country |
USA |
| Sample Isolation Comments |
|
|
Sample Collection Method
|
|
|
Contact Name
|
|
|
Contact Email
|
|
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
|
| Ecosystem Category |
|
| Ecosystem Type |
|
| Ecosystem Subtype |
|
| Specific Ecosystem |
|
| Ecosystem Path Id |
1 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
USA: Georgia, Tifton |
|
Latitude
(MIGS-4.1)
|
|
|
Longitude
(MIGS-4.2)
|
|
|
LatLong Information
|
|
| Geographical Map | No mapping data available. |
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Growth Conditions |
S.b. inbreds were planted in Tifton GA on June 9th, 2017. On July 10th apical meristem tissue was elicited with heat killed Fusarium venenatum and 72h later on July 13th all plants were harvested. Locally wounded and reacted tissue was harvested with a razor blade, ground in liquid N2 and stored at -80C. |
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
