Studies
|
56,329 |
|
Biosamples
|
196,776 |
|
Sequencing Projects
|
525,145 |
|
Analysis Projects
|
385,404 |
| Organisms | 484,214 |
| ORGANISM INFORMATION | |||||
|---|---|---|---|---|---|
| GOLD Organism ID |
Go0368003 |
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Organism Name
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Endozoicomonas sp. SP-A_B23 |
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| Other Names |
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| Common Name |
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| Domain |
BACTERIAL |
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Genus
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| Genus Synonyms |
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Species
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| Species Synonyms |
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| Strain |
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| Subspecies |
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Phylogenetic Markers
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Taxonomy Classification Method
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| Serovar/Cultivar |
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| Phylum |
PROTEOBACTERIA-GAMMA |
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NCBI Taxonomy ID
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| Type Strain |
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| Culture Collection ID |
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| Organism Type |
Natural |
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| Cultured |
No |
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| Uncultured Type |
Single Cell |
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| Comments |
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| Biosafety Level |
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Taxon DOI
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Exemplar DOI
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|
Exemplar Name
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| Genbank 16S ID |
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| Is Public |
Yes |
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| Related Sequencing Projects |
1 |
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| Related Analysis Projects |
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| NCBI TAXONOMY | |||||
|---|---|---|---|---|---|
| NCBI Taxonomy Name |
Endozoicomonas |
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|
NCBI Tax ID
|
|
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| NCBI Superkingdom |
Bacteria |
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| NCBI Kingdom |
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| NCBI Phylum |
Pseudomonadota |
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| NCBI Class |
Gammaproteobacteria |
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| NCBI Order |
Oceanospirillales |
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| NCBI Family |
Endozoicomonadaceae |
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| NCBI Genus |
Endozoicomonas |
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| NCBI Species |
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| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
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| Cell Shape |
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| Color |
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| Gram Stain |
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| Motility |
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| Oxygen Requirement (MIGS-22) |
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| pH |
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| Salinity (MIGS-6.3) |
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| Pressure |
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| Sporulation |
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Carbon Source
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| Symbiont Name |
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| Symbiont Taxon Id |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Growth Temperature |
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| Cell Length |
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| Commercial Strain |
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| Commercial Strain Comments |
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| Cell Arrangements |
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| Diseases (MIGS-15) |
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| Habitats (MIGS-6) |
Coral |
| Metabolism |
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| Phenotypes |
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| Energy Sources |
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| Body Products |
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| Biotic Relationships (MIGS-14) |
Symbiotic |
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Propagation
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| ORGANISM ISOLATION | |
|---|---|
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Sample Collection Date
(MIGS-5)
|
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Sample Isolation Publication
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Sample Collection Site
(MIGS-13)
|
Coral tissue |
| Isolation Country/Ocean |
Saudi Arabia |
| Sample Isolation Comments |
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|
Collection Method
|
Sample collection is described in detail in: Neave, M. J., Michell, C. T., Apprill, A. & Voolstra, C. R. Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts. Sci. Rep. 7, 40579, doi:10.1038/srep40579 |
|
Contact Name
|
Christian R. Voolstra |
|
Contact Email
|
[email protected] |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
Host-associated |
| Ecosystem Category |
Invertebrates |
| Ecosystem Type |
Cnidaria |
| Ecosystem Subtype |
Unclassified |
| Specific Ecosystem |
Unclassified |
| Ecosystem Path Id |
4801 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
Saudi Arabia: Al Fahal Reef, Red Sea |
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Latitude
(MIGS-4.1)
|
22.251667 |
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Longitude
(MIGS-4.2)
|
38.956433 |
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LatLong Information
|
Verified |
| Geographical Map | |
| Broad-scale Environmental Context (MIxS:0000012) |
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| Local Environmental Context (MIxS:0000013) |
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| Environmental Medium (MIxS:0000014) |
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| Altitude (MIGS-4.4) |
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| Elevation |
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| Depth (MIGS-4.3) | Range is 2 to -10 Meters. |
| Subsurface Depth |
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| Temperature Range |
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| Sample Collection Temperature |
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| Chlorophyll Concentration |
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| Nitrate Concentration |
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| Oxygen Concentration |
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| Salinity Concentration |
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| Methane Concentration (mmol) |
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Sample Conductivity
|
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| Growth Conditions |
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| Bicarbonate Concentration (mM) |
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| Soluble Iron Concentration (uM) |
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| Hydrogen Sulfide Concentration (mM) |
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| Hydrogen Sulfide Presence |
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| Irradiance |
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| ProPortal Ocean |
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| ProPortal Isolation |
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| ProPortal Station |
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| ProPortal WOA Temperature |
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| ProPortal WOA Salinty |
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| ProPortal WOA Oxygen |
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| ProPortal WOA Silicate |
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| ProPortal WOA Phosphate |
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| ProPortal WOA Nitrate |
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| HOST METADATA | |
|---|---|
|
Isolation Host Name
|
Stylophora pistillata |
|
Host Taxonomy ID
|
50429 |
| Host Gender |
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| Host Race |
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| Host Age |
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| Host Health Condition |
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Health Disease Status
|
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| Patient Visit Number |
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| Host Medication |
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| Medical Record Number |
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| Host Body Site |
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| Host Body Subsite |
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| Host Body Product |
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| Host Specificity or Range |
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| Host Comments |
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