ORGANISM INFORMATION
GOLD Organism ID Go0009923
Organism Name Yersinia enterocolitica palearctica sv. O:3 bt. 4 Y11
Other Names
Common Name
Domain BACTERIAL
Genus Yersinia
Genus Synonyms
Species Yersinia enterocolitica
Species Synonyms
Strain Y11
Subspecies palearctica
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar sv. O:3, bv. 4
Phylum PROTEOBACTERIA-GAMMA
NCBI Taxonomy ID
930944  Source is NCBI's Taxonomy
Type Strain Yes
Culture Collection ID CCUG 52867
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level 2
Taxon DOI 10.1601/tx.3357
Exemplar DOI 10.1601/ex.3357
Exemplar Name Yersinia enterocolitica palearctica
Genbank 16S ID
Is Public Yes
Related Sequencing Projects 1
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Taxonomy Name Yersinia enterocolitica subsp. palearctica Y11
NCBI Tax ID
930944  Source is NCBI's Taxonomy
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Pseudomonadota
NCBI Class Gammaproteobacteria
NCBI Order Enterobacterales
NCBI Family Yersiniaceae
NCBI Genus Yersinia
NCBI Species Yersinia enterocolitica
   
ORGANISM METADATA
Cell Diameter
Cell Shape Rod-shaped
Color
Gram Stain Gram-
Motility Motile
Oxygen Requirement (MIGS-22) Aerobe
pH
Salinity (MIGS-6.3)
Pressure
Sporulation Nonsporulating
Carbon Source
Growth Temperature Range is 28 to 30 Celsius.
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements Singles
Diseases (MIGS-15) Gastroenteritis
Food poisoning
Habitats (MIGS-6) Host
Metabolism
Phenotypes Pathogen
Energy Sources Heterotroph
Body Products Feces
Biotic Relationships (MIGS-14) Free living
Propagation
   
ORGANISM ISOLATION
Sample Collection Date (MIGS-5)
Sample Isolation Publication

Please enter a PubMed Id or delete an existing PubMed ID to remove the publication
PubMed Id
Sample Collection Site (MIGS-13) stool of a human patient
Isolation Country/Ocean Germany
Sample Isolation Comments
Collection Method
Contact Name
Contact Email
   
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Mammals: Human
Ecosystem Type Digestive system
Ecosystem Subtype Large intestine
Specific Ecosystem Fecal
Ecosystem Path Id 3920
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Munich
Latitude (MIGS-4.1) 48.129
Longitude (MIGS-4.2) 11.579
LatLong Information Inferred
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate
   
HOST METADATA
Isolation Host Name Homo sapiens
Host Taxonomy ID 9606
Host Gender
Host Race
Host Age
Host Health Condition
Health Disease Status
Patient Visit Number
Host Medication
Medical Record Number
Host Body Site Gastrointestinal tract
Host Body Subsite
Host Body Product Feces
Host Specificity or Range
Host Comments