ORGANISM INFORMATION
GOLD Organism ID Go0002149
Organism Name Verrucomicrobium spinosum DSM 4136
Other Names
Common Name
Domain BACTERIAL
Genus Verrucomicrobium
Genus Synonyms
Species Verrucomicrobium spinosum
Species Synonyms
Strain DSM 4136
Subspecies
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar
Phylum VERRUCOMICROBIA
NCBI Taxonomy ID 240016
Type Strain Yes
Culture Collection ID DSM 4136
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level 1
Taxon DOI 10.1601/tx.8402
Exemplar DOI 10.1601/ex.8402
Exemplar Name Verrucomicrobium spinosum
Genbank 16S ID X90515
Is Public Yes
Related Sequencing Projects 1
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Organism Name Verrucomicrobium spinosum DSM 4136 = JCM 18804
NCBI Tax ID 240016
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Verrucomicrobia
NCBI Class Verrucomicrobiae
NCBI Order Verrucomicrobiales
NCBI Family Verrucomicrobiaceae
NCBI Genus Verrucomicrobium
NCBI Species Verrucomicrobium spinosum
   
ORGANISM METADATA
Cell Diameter
Cell Shape Rod-shaped
Color Yellow
Gram Stain Gram-
Motility Nonmotile
Oxygen Requirement (MIGS-22) Facultative
pH
Salinity (MIGS-6.3)
Pressure
Sporulation Nonsporulating
Carbon Source
Growth Temperature
30
Celcius.
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements Singles
Diseases (MIGS-15) None
Habitats (MIGS-6) Aquatic
Lake
Fresh water
Metabolism
Phenotypes Catalase positive
Energy Sources Chemoorganotroph
Biotic Relationships (MIGS-14) Free living
Propagation
   
ORGANISM ISOLATION
Collection Date (MIGS-5) 1/1/1988
Sample Isolation Publication
Sample Collection Site (MIGS-13) fresh water from lake
Isolation Country Germany
Sample Isolation Comments
Collection Method
Contact Name Ward N
Contact Email nward@tigr.org
   
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Lentic
Specific Ecosystem Unclassified
Ecosystem Path Id 4174
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Lake Vollstedter, Germany
Latitude (MIGS-4.1) 54.240548
Longitude (MIGS-4.2) 9.854573
LatLong Information Inferred
Geographical Map
Broad-scale environmental context (MIxS:0000012)
Local environmental context (MIxS:0000013)
Environmental medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
30
Celcius.
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate