ORGANISM INFORMATION | |||||
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GOLD Organism ID |
Go0000704 |
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Organism Name
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Clostridium perfringens 13 |
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Other Names |
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Common Name |
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Domain |
BACTERIAL |
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Genus
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Clostridium |
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Genus Synonyms |
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Species
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Clostridium perfringens |
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Species Synonyms |
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Strain |
13 |
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Subspecies |
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Phylogenetic Markers
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Taxonomy Classification Method
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Serovar/Cultivar |
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Phylum |
BACILLOTA |
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NCBI Taxonomy ID
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Type Strain |
Unknown |
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Culture Collection ID |
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Organism Type |
Natural |
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Cultured |
Yes |
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Culture Type |
Isolate |
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Comments |
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Biosafety Level |
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Taxon DOI
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Exemplar DOI
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Exemplar Name
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Genbank 16S ID |
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Is Public |
Yes |
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Related Sequencing Projects |
1 |
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Related Analysis Projects |
1 |
NCBI TAXONOMY | |||||
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NCBI Taxonomy Name |
Clostridium perfringens str. 13 |
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NCBI Tax ID
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NCBI Superkingdom |
Bacteria |
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NCBI Kingdom |
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NCBI Phylum |
Bacillota |
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NCBI Class |
Clostridia |
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NCBI Order |
Eubacteriales |
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NCBI Family |
Clostridiaceae |
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NCBI Genus |
Clostridium |
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NCBI Species |
Clostridium perfringens |
ORGANISM METADATA | |
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Cell Diameter |
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Cell Shape |
Rod-shaped |
Color |
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Gram Stain |
Gram+ |
Motility |
Motile |
Oxygen Requirement (MIGS-22) |
Anaerobe |
pH |
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Salinity (MIGS-6.3) |
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Pressure |
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Sporulation |
Sporulating |
Carbon Source
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Growth Temperature |
37 Celsius.
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Cell Length |
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Commercial Strain |
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Commercial Strain Comments |
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Cell Arrangements |
Singles Pairs |
Diseases (MIGS-15) |
Gas gangrene Necrotizing enterocolitis Food poisoning Enteritis necroticans |
Habitats (MIGS-6) |
Soil Host |
Metabolism |
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Phenotypes |
Pathogen |
Energy Sources |
Chemoorganotroph |
Biotic Relationships (MIGS-14) |
Free living |
Propagation
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ORGANISM ISOLATION | |
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Sample Collection Date
(MIGS-5)
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Sample Isolation Publication
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Sample Collection Site
(MIGS-13)
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Soil isolate |
Isolation Country/Ocean |
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Sample Isolation Comments |
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Collection Method
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Contact Name
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Shimizu T |
Contact Email
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[email protected] |
ECOSYSTEM CLASSIFICATION
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Ecosystem |
Environmental |
Ecosystem Category |
Terrestrial |
Ecosystem Type |
Soil |
Ecosystem Subtype |
Unclassified |
Specific Ecosystem |
Unclassified |
Ecosystem Path Id |
4212 |
ENVIRONMENTAL INFORMATION | |
Geographic Location
(MIGS-4)
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Soil isolate |
Latitude
(MIGS-4.1)
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Longitude
(MIGS-4.2)
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LatLong Information
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Geographical Map | No mapping data available. |
Broad-scale Environmental Context (MIxS:0000012) |
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Local Environmental Context (MIxS:0000013) |
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Environmental Medium (MIxS:0000014) |
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Altitude (MIGS-4.4) |
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Elevation |
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Depth (MIGS-4.3) |
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Subsurface Depth |
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Temperature Range |
Mesophile |
Sample Collection Temperature |
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Chlorophyll Concentration |
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Nitrate Concentration |
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Oxygen Concentration |
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Salinity Concentration |
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Methane Concentration (mmol) |
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Sample Conductivity
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Growth Conditions |
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Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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ProPortal Ocean |
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ProPortal Isolation |
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ProPortal Station |
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ProPortal WOA Temperature |
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ProPortal WOA Salinty |
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ProPortal WOA Oxygen |
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ProPortal WOA Silicate |
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ProPortal WOA Phosphate |
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ProPortal WOA Nitrate |
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