ORGANISM INFORMATION
GOLD Organism ID Go0000137
Organism Name Rhizorhabdus wittichii RW1
Other Names
Common Name
Domain BACTERIAL
Genus Rhizorhabdus
Genus Synonyms
Species Rhizorhabdus wittichii
Species Synonyms
Strain RW1
Subspecies
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar
Phylum PROTEOBACTERIA-ALPHA
NCBI Taxonomy ID
392499  Source is NCBI's Taxonomy
Type Strain Yes
Culture Collection ID DSM 6014
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level
Taxon DOI 10.1601/tx.1201
Exemplar DOI 10.1601/ex.1201
Exemplar Name Sphingomonas wittichii
Genbank 16S ID AB021492
Is Public Yes
Related Sequencing Projects 1
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Taxonomy Name Rhizorhabdus wittichii RW1
NCBI Tax ID
392499  Source is NCBI's Taxonomy
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Pseudomonadota
NCBI Class Alphaproteobacteria
NCBI Order Sphingomonadales
NCBI Family Sphingomonadaceae
NCBI Genus Rhizorhabdus
NCBI Species Rhizorhabdus wittichii
   
ORGANISM METADATA
Cell Diameter
Cell Shape Rod-shaped
Color
Gram Stain Gram-
Motility Motile
Oxygen Requirement (MIGS-22) Aerobe
pH
Salinity (MIGS-6.3)
Pressure
Sporulation Nonsporulating
Carbon Source
Growth Temperature
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements
Diseases (MIGS-15) None
Habitats (MIGS-6) Aquatic
Fresh water
Metabolism
Phenotypes
Energy Sources Heterotroph
Biotic Relationships (MIGS-14) Free living
Propagation
   
ORGANISM ISOLATION
Sample Collection Date (MIGS-5)
Sample Isolation Publication

Please enter a PubMed Id or delete an existing PubMed ID to remove the publication
PubMed Id
Sample Collection Site (MIGS-13) Elbe River in Germany
Isolation Country/Ocean Germany
Sample Isolation Comments
Collection Method
Contact Name Halden, Rolf U.
Contact Email [email protected]
   
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Lotic
Specific Ecosystem Unclassified
Ecosystem Path Id 4645
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Elbe River, downstream Hamburg harbour
Latitude (MIGS-4.1) 53.5528
Longitude (MIGS-4.2) 9.9806
LatLong Information Inferred
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
30
Celsius.
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate