ORGANISM INFORMATION
GOLD Organism ID Go0000016
Organism Name Lachnoclostridium phytofermentans ISDg
Other Names Clostridium phytofermentans ISDg
Common Name
Domain BACTERIAL
Genus Lachnoclostridium
Genus Synonyms Clostridium
Species Lachnoclostridium phytofermentans
Species Synonyms
Strain ISDg
Subspecies
Phylogenetic Markers
Taxonomy Classification Method
Serovar/Cultivar
Phylum BACILLOTA
NCBI Taxonomy ID
357809  Source is NCBI's Taxonomy
Type Strain Yes
Culture Collection ID ATCC 700394
Organism Type Natural
Cultured Yes
Culture Type Isolate
Comments
Biosafety Level 1
Taxon DOI 10.1601/tx.3993
Exemplar DOI 10.1601/ex.3993
Exemplar Name Clostridium phytofermentans
Genbank 16S ID AF020431
Is Public Yes
Related Sequencing Projects 3
Related Analysis Projects 1
   
NCBI TAXONOMY
NCBI Taxonomy Name Lachnoclostridium phytofermentans ISDg
NCBI Tax ID
357809  Source is NCBI's Taxonomy
NCBI Superkingdom Bacteria
NCBI Kingdom
NCBI Phylum Bacillota
NCBI Class Clostridia
NCBI Order Eubacteriales
NCBI Family Lachnospiraceae
NCBI Genus Lachnoclostridium
NCBI Species Lachnoclostridium phytofermentans
   
ORGANISM METADATA
Cell Diameter
Cell Shape Rod-shaped
Color
Gram Stain Gram+
Motility Motile
Oxygen Requirement (MIGS-22) Anaerobe
pH
Salinity (MIGS-6.3)
Pressure
Sporulation Sporulating
Carbon Source
Growth Temperature
37
Celsius.
Cell Length
Commercial Strain
Commercial Strain Comments
Cell Arrangements Singles
Pairs
Diseases (MIGS-15) None
Habitats (MIGS-6) Soil
Terrestrial
Metabolism Ethanol production
Acetate producer
Cellulose degrader
Phenotypes
Energy Sources Chemoorganotroph
Biotic Relationships (MIGS-14) Free living
Propagation
   
ORGANISM ISOLATION
Sample Collection Date (MIGS-5) 1/1/1991
Sample Isolation Publication International Journal of Systematic and Evolutionary Microbiology: 52(Pt 4):1155-1160 Clostridium phytofermentans sp. nov., a cellulolytic mesophile from forest soil.
PubMed: 12148621 DOI: 10.1099/00207713-52-4-1155
Please enter a PubMed Id or delete an existing PubMed ID to remove the publication
PubMed Id
Sample Collection Site (MIGS-13) Forest soil near the Quabbin Reservoir in Massachusetts
Isolation Country/Ocean USA
Sample Isolation Comments Isolated from damp silt in the bed of an intermittent stream in a forested site near Quabbin Reservoir in Massachusetts
Collection Method
Contact Name Kaela O'Dell
Contact Email [email protected]
   
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Soil
Ecosystem Subtype Temperate forest
Specific Ecosystem Bulk soil
Ecosystem Path Id 6005
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Quabbin Reservoir in Massachusetts
Latitude (MIGS-4.1) 42.404699
Longitude (MIGS-4.2) -72.308526
LatLong Information Inferred
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude (MIGS-4.4)
Elevation
144
Meters.
Depth (MIGS-4.3)
Subsurface Depth
Temperature Range Mesophile
Sample Collection Temperature
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Growth Conditions
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
ProPortal Ocean
ProPortal Isolation
ProPortal Station
ProPortal WOA Temperature
ProPortal WOA Salinty
ProPortal WOA Oxygen
ProPortal WOA Silicate
ProPortal WOA Phosphate
ProPortal WOA Nitrate