Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
 - indicates that you can edit this field inline. Click return to save your edits. | |||||
| BIOSAMPLE INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Biosample ID
|
Gb0191648 |
||||
|
Biosample Name
|
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_120 |
||||
|
Other Names
|
|
||||
|
Habitat
(MIGS-6)
|
bulk soil |
||||
|
Community
|
microbial communities |
||||
|
Location
|
The East River watershed near Crested Butte, Colorado, USA |
||||
|
Identifier
|
ER_120 |
||||
|
NCBI Taxonomy ID
|
|
||||
|
NCBI Taxonomy Name
|
soil metagenome |
||||
|
Add Date
|
2018-06-22 |
||||
|
Biosample Description
|
Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States |
||||
|
Biosample Information Visibility
|
Public | ||||
|
ECOSYSTEM CLASSIFICATION
|
|||||
| Ecosystem |
Environmental |
||||
| Ecosystem Category |
Terrestrial |
||||
| Ecosystem Type |
Soil |
||||
| Ecosystem Subtype |
Floodplain |
||||
| Specific Ecosystem |
Unclassified |
||||
| Ecosystem Path Id |
5610 |
||||
| BIOSAMPLE COMPOSITION | |||||
| Number of Studies |
1 |
||||
| Number of Seq Projects |
2 |
||||
| Number of Analysis Projects |
5 |
||||
| Number of Related Biosamples |
47 |
||||
| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
soil |
|
Sample Collection Date
(MIGS-5)
|
2017-03-07 |
|
Sample Collection Publication
|
|
| Sample Isolation Comments |
The depth of the sample is more than .15 meters |
|
Size Fraction
|
|
| Sample Isolation Country/Ocean |
USA |
|
Sample Collection Method
|
|
|
Sample Contact Name
|
Patrick Sorensen |
|
Sample Contact Email
|
[email protected] |
| SIP METADATA | |
| Sample Volume (ul) |
|
| Concentration (ng/ul) |
|
| Fraction Density (g/ml) |
|
| Sample Group Name |
|
| Isotope Label |
|
| - indicates that you can edit this field inline. Click return to save your edits. | |||||
| ENVIRONMENTAL INFORMATION | |||||
|---|---|---|---|---|---|
|
Geographic Location
(MIGS-4)
|
USA: Colorado |
||||
|
Latitude
(MIGS-4.1)
|
38.920399525 |
||||
|
Longitude
(MIGS-4.2)
|
-106.948286972 |
||||
|
LatLong Information
|
|
||||
| Geographical Map | |||||
| Broad-scale Environmental Context (MIxS:0000012) |
|
||||
| Local Environmental Context (MIxS:0000013) |
|
||||
| Environmental Medium (MIxS:0000014) |
|
||||
|
Altitude
(meter)
(MIGS-4.4)
|
|
||||
| Elevation |
2780 Meters.
|
||||
|
Depth
(MIGS-4.3)
|
0.15 Meters.
|
||||
| Subsurface Depth |
|
||||
| Sample Collection Temperature |
|
||||
| Salinity (MIGS-6.3) |
|
||||
| Pressure |
|
||||
| pH |
|
||||
| Chlorophyll Concentration |
|
||||
| Nitrate Concentration |
|
||||
| Oxygen Concentration |
|
||||
| Salinity Concentration |
|
||||
| Methane Concentration (mmol) |
|
||||
|
Sample Conductivity
|
|
||||
| Habitat |
bulk soil |
||||
| Bicarbonate Concentration (mM) |
|
||||
| Soluble Iron Concentration (uM) |
|
||||
| Hydrogen Sulfide Concentration (mM) |
|
||||
| Hydrogen Sulfide Presence |
|
||||
| Irradiance |
|
||||
| Oxygen Presence |
|
||||
| GROWTH CONDITIONS | |||||
| Growth Conditions |
|
||||
| - indicates that you can edit this field inline. Click return to save your edits. | |
| SOIL ENVIRONMENTAL INFORMATION | |
|---|---|
|
Soil Depth
(meter)
(MIGS-4.3)
|
|
| Soil Elevation (meter) |
|
|
Mean Annual Precipitation
(millimeter)
|
|
|
Mean Seasonal Precipitation
(millimeter)
|
|
| Mean Annual Temperature (Celsius) |
|
| Mean Seasonal Temperature (Celsius) |
|
| Link Climate Info |
|
| LAND USE & HISTORICAL DATA | |
| Crop Rotation |
|
|
Current Land Use
|
|
|
Current Vegetation
|
|
|
Current Vegetation Method
|
|
|
Fire
|
|
|
Flooding
|
|
|
Extreme Event
|
|
| Previous Land Use |
|
|
Previous Land Use Method
|
|
| PHYSICOCHEMICAL PROPERTIES | |
|
Drainage Class
|
|
|
FAO Class
|
|
|
Horizon
|
|
|
Horizon Method
|
|
|
Link Class Info
|
|
|
Local Class
|
|
|
Local Class Method
|
|
|
Profile Position
|
|
| Sieving |
|
|
Slope Aspect
(degrees)
|
|
|
Slope Gradient
(percent)
|
|
|
Texture
|
|
|
Texture Method
|
|
|
Tillage
|
|
|
Soil Type
|
|
| Soil Type Method |
|
|
Aluminium Saturation
(percent)
|
|
|
Aluminium Saturation Method
|
|
|
Heavy Metals
(microg/gram)
|
|
|
Heavy Metals Method
|
|
|
Microbial Biomass
|
|
|
Microbial Biomass Method
|
|
| Soil pH |
|
|
pH Method
|
|
| Soil Salinity (MIGS-6.3) |
|
|
Salinity Method
|
|
|
Total Nitrogen
|
|
|
Total Nitrogen Method
|
|
| Total Organic Carbon (grams/kilogram) |
|
|
Total Organic Carbon Method
|
|
|
Water Content
|
|
|
Water Content Soil Method
|
|
|
Link Addit Analysis
|
|
|
Miscellaneous Parameters
|
|
|
Agrochem Addition
|
|
| SAMPLE PREPARATION | |
|
Pool DNA Extracts
|
|
| Soil Sample Biomass |
|
| Soil Sample Volume/Weight DNA Extraction |
|
|
Storage Conditions
|
|
| Package Version |
6 |
Changing the biosample visibility.
Do you want to continue with this visibility change?
Changing the biosample visibility:
Do you want to continue with this visibility change?
