Studies
|
47,510 |
|
Biosamples
|
122,171 |
|
Sequencing Projects
|
392,175 |
|
Analysis Projects
|
311,866 |
| Organisms | 403,926 |
 - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE INFORMATION | |
|---|---|
|
GOLD Biosample ID
|
Gb0150325 |
|
Biosample Name
|
Brachypodium distachyon Bd18 inoculated with Cochliobolus sativus ND4008 from North Dakota, USA - Bd18-1 ND4008 1D-2redo |
|
Other Names
|
|
|
Habitat
(MIGS-6)
|
Leaves |
|
Community
|
fungal communities |
|
Location
|
North Dakota State University |
|
Identifier
|
Bd18-1 ND4008 1D-2redo |
|
Add Date
|
2017-03-10 |
|
Biosample Description
|
Metatranscriptome of Brachypodium distachyon Bd18 inoculated with Cochliobolus sativus ND4009 |
|
Biosample Information
|
|
|
Biosample Information Visibility
|
Public |
|
ECOSYSTEM CLASSIFICATION
|
|
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Type |
Phyllosphere |
| Ecosystem Subtype |
Leaf |
| Specific Ecosystem |
Unclassified |
| Ecosystem Path Id |
5269 |
| BIOSAMPLE COMPOSITION | |
| Number of Studies |
1 |
| Number of Seq Projects |
1 |
| Number of Analysis Projects |
0 |
| Number of Related Biosamples |
48 |
| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
Greenhouse, Brachypodium leaves |
|
Sample Collection Date
(MIGS-5)
|
8/16/2016 |
|
Sample Collection Publication
|
|
| Sample Isolation Comments |
|
|
Size Fraction
|
|
| Sample Isolation Country |
USA |
|
Sample Collection Method
|
|
|
Sample Contact Name
|
Gerrit H. Kema |
|
Sample Contact Email
|
gert.kema@wur.nl |
| - indicates that you can edit this field inline. Click return to save your edits. | |
| ENVIRONMENTAL INFORMATION | |
|---|---|
|
Geographic Location
(MIGS-4)
|
USA: North Dakota, Fargo |
|
Latitude
(MIGS-4.1)
|
46.8959 |
|
Longitude
(MIGS-4.2)
|
-96.8036 |
|
LatLong Information
|
|
| Geographical Map | |
| Broad-scale environmental context (MIxS:0000012) |
|
| Local environmental context (MIxS:0000013) |
shoot system (PO_0009006)
|
| Environmental medium (MIxS:0000014) |
leaf (PO_0025034)
|
|
Altitude
(meter)
(MIGS-4.4)
|
|
| Elevation |
274 Meters.
|
|
Depth
(MIGS-4.3)
|
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| pH |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Habitat |
Leaves |
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| Oxygen Presence |
|
| GROWTH CONDITIONS | |
| Growth Conditions |
|
| - indicates that you can edit this field inline. Click return to save your edits. | |
| HOST INFORMATION | |
|---|---|
|
Isolation Host Name
|
Brachypodium distachyon |
|
Host Taxonomy ID
|
15368 |
| Host Gender |
|
| Host Race |
|
| Host Age |
|
| Host Health Condition |
|
|
Health Disease Status
|
|
| Patient Visit Number |
|
| Host Medication |
|
| Medical Record Number |
|
| Host Body Site |
|
| Host Body Subsite |
|
| Host Body Product |
|
| Host Specificity or Range |
|
| Host Comments |
|
| Host Diseases (MIGS-15) |
|
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