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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0379795
Biosample Name Chicken duodenum microbial communities from Shenzhen, China - CGM-duodenum
Other Names
Habitat (MIGS-6) Chicken duodenum
Community microbial communities
Location from Shenzhen, China
Identifier CGM-duodenum
NCBI Taxonomy ID
506600  NCBI Metagenome Taxonomy
NCBI Taxonomy Name chicken gut metagenome
Add Date 2023-05-24
Biosample Description Chicken duodenum microbial communities from Shenzhen, China
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Birds
Ecosystem Type Digestive system
Ecosystem Subtype Small intestine
Specific Ecosystem Duodenum
Ecosystem Path Id 4152
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 0
Number of Related Biosamples 4
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) Chicken Duodenum
Sample Collection Date (MIGS-5) 2021-01-01
Sample Collection Publication

Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean China
Sample Collection Method
Sample Contact Name
Sample Contact Email
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) China: shenzhen
Latitude (MIGS-4.1) 22.6
Longitude (MIGS-4.2) 114.5
LatLong Information
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
Local Environmental Context (MIxS:0000013)
Environmental Medium (MIxS:0000014)
Altitude  (meter)  (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  Chicken duodenum
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions
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HOST INFORMATION
Isolation Host Name Gallus gallus
Host Taxonomy ID 9031
Host Gender
Host Race
Host Age
Host Health Condition
Health Disease Status
Patient Visit Number
Host Medication
Medical Record Number
Host Body Site
Host Body Subsite
Host Body Product
Host Specificity or Range
Host Comments
Host Diseases (MIGS-15)

 

 

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