Studies
|
56,336 |
|
Biosamples
|
196,971 |
|
Sequencing Projects
|
525,344 |
|
Analysis Projects
|
385,119 |
| Organisms | 484,224 |
 - indicates that you can edit this field inline. Click return to save your edits. | |||||
| BIOSAMPLE INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Biosample ID
|
Gb0306518 |
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Biosample Name
|
Woodchip biofilm microbial communities from lab scale WBRs in New York, USA - hf_drw_p2_t7_h28_prok |
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Other Names
|
|
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Habitat
(MIGS-6)
|
Woodchip biofilm |
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Community
|
microbial communities |
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Location
|
lab scale WBR in Cornell University, Ithaca, NY, USA |
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Identifier
|
hf_drw_p2_t7_h28_prok |
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NCBI Taxonomy ID
|
|
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NCBI Taxonomy Name
|
bioreactor metagenome |
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Add Date
|
2021-09-24 |
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Biosample Description
|
Woodchip biofilm microbial communities from lab scale WBR in Cornell University, Ithaca, NY, USA; operated under alternate wetting-drying |
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Biosample Information Visibility
|
Public | ||||
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ECOSYSTEM CLASSIFICATION
|
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| Ecosystem |
Engineered |
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| Ecosystem Category |
Bioreactor |
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| Ecosystem Type |
Denitrification |
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| Ecosystem Subtype |
Woodchip Bioreactor (WBR) |
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| Specific Ecosystem |
Woodchip biofilm |
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| Ecosystem Path Id |
5853 |
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| BIOSAMPLE COMPOSITION | |||||
| Number of Studies |
1 |
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| Number of Seq Projects |
1 |
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| Number of Analysis Projects |
2 |
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| Number of Related Biosamples |
25 |
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| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
Woodchip biofilm |
|
Sample Collection Date
(MIGS-5)
|
2020-11-26 |
|
Sample Collection Publication
|
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| Sample Isolation Comments |
|
|
Size Fraction
|
|
| Sample Isolation Country/Ocean |
USA |
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Sample Collection Method
|
|
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Sample Contact Name
|
Philip McGuire |
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Sample Contact Email
|
[email protected] |
| SIP METADATA | |
| Sample Volume (ul) |
|
| Concentration (ng/ul) |
|
| Fraction Density (g/ml) |
|
| Sample Group Name |
|
| Isotope Label |
|
| - indicates that you can edit this field inline. Click return to save your edits. | |
| ENVIRONMENTAL INFORMATION | |
|---|---|
|
Geographic Location
(MIGS-4)
|
USA: New York |
|
Latitude
(MIGS-4.1)
|
42.44568 |
|
Longitude
(MIGS-4.2)
|
-76.470892 |
|
LatLong Information
|
|
| Geographical Map | |
| Broad-scale Environmental Context (MIxS:0000012) |
|
| Local Environmental Context (MIxS:0000013) |
|
| Environmental Medium (MIxS:0000014) |
|
|
Altitude
(meter)
(MIGS-4.4)
|
|
| Elevation |
270 Meters.
|
|
Depth
(MIGS-4.3)
|
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| pH |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
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| Oxygen Concentration |
|
| Salinity Concentration |
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| Methane Concentration (mmol) |
|
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Sample Conductivity
|
|
| Habitat |
Woodchip biofilm |
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| Oxygen Presence |
|
| GROWTH CONDITIONS | |
| Growth Conditions |
|
Custom Biogas/Reactor Metadata Package* oDM - organic dry matter | |
| - indicates that you can edit this field inline. Click return to save your edits. | |
| Substrates |
|
| Temperature |
|
| Retention Time |
|
| Yield (L/Kg-oDM) |
|
| Volatile Organic Acids (VOA) |
|
| Total Inorganic Carbon (TIC) |
|
| VOA/TIC |
|
| Acetic Acid |
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| Ammonium |
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| Butanol |
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| Ethanol |
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| Propanol |
|
| Methanol |
|
| Butyl Acid |
|
| Iso Butyl Acid |
|
| Valeric Acid |
|
| Iso Valeric Acid |
|
| Propionic Acid |
|
| Methane Percentage |
|
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