Studies
|
56,011 |
|
Biosamples
|
183,990 |
|
Sequencing Projects
|
508,072 |
|
Analysis Projects
|
381,502 |
| Organisms | 480,513 |
 - indicates that you can edit this field inline. Click return to save your edits. | |||||
| BIOSAMPLE INFORMATION | |||||
|---|---|---|---|---|---|
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GOLD Biosample ID
|
Gb0305923 |
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Biosample Name
|
Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere |
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Other Names
|
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Habitat
(MIGS-6)
|
Root endosphere |
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Community
|
microbial communities |
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Location
|
poplar common garden site in Corvallis, Oregon, USA |
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Identifier
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GW-4579-Co2_44_8 endosphere |
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NCBI Taxonomy ID
|
|
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NCBI Taxonomy Name
|
root metagenome |
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Add Date
|
2021-08-20 |
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Biosample Description
|
Root microbial communities from poplar common garden site in Corvallis, Oregon, USA |
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Biosample Information Visibility
|
Public | ||||
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ECOSYSTEM CLASSIFICATION
|
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| Ecosystem |
Host-associated |
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| Ecosystem Category |
Plants |
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| Ecosystem Type |
Roots |
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| Ecosystem Subtype |
Endosphere |
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| Specific Ecosystem |
Unclassified |
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| Ecosystem Path Id |
5304 |
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| BIOSAMPLE COMPOSITION | |||||
| Number of Studies |
1 |
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| Number of Seq Projects |
1 |
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| Number of Analysis Projects |
1 |
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| Number of Related Biosamples |
317 |
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| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
Fine root endosphere |
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Sample Collection Date
(MIGS-5)
|
9/4/2020 |
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Sample Collection Publication
|
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| Sample Isolation Comments |
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|
Size Fraction
|
|
| Sample Isolation Country/Ocean |
USA |
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Sample Collection Method
|
|
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Sample Contact Name
|
Christopher W. Schadt |
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Sample Contact Email
|
[email protected] |
| SIP METADATA | |
| Sample Volume (ul) |
|
| Concentration (ng/ul) |
|
| Fraction Density (g/ml) |
|
| Sample Group Name |
|
| Isotope Label |
|
| - indicates that you can edit this field inline. Click return to save your edits. | |||||
| ENVIRONMENTAL INFORMATION | |||||
|---|---|---|---|---|---|
|
Geographic Location
(MIGS-4)
|
USA: Oregon |
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|
Latitude
(MIGS-4.1)
|
44.587786 |
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|
Longitude
(MIGS-4.2)
|
-123.193893 |
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LatLong Information
|
|
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| Geographical Map | |||||
| Broad-scale environmental context (MIxS:0000012) |
|
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| Local environmental context (MIxS:0000013) |
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| Environmental medium (MIxS:0000014) |
|
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Altitude
(meter)
(MIGS-4.4)
|
|
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| Elevation |
62 Meters.
|
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Depth
(MIGS-4.3)
|
|
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| Subsurface Depth |
|
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| Sample Collection Temperature |
|
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| Salinity (MIGS-6.3) |
|
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| Pressure |
|
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| pH |
|
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| Chlorophyll Concentration |
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| Nitrate Concentration |
|
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| Oxygen Concentration |
|
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| Salinity Concentration |
|
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| Methane Concentration (mmol) |
|
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Sample Conductivity
|
|
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| Habitat |
Root endosphere |
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| Bicarbonate Concentration (mM) |
|
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| Soluble Iron Concentration (uM) |
|
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| Hydrogen Sulfide Concentration (mM) |
|
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| Hydrogen Sulfide Presence |
|
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| Irradiance |
|
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| Oxygen Presence |
|
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| GROWTH CONDITIONS | |||||
| Growth Conditions |
|
||||
| - indicates that you can edit this field inline. Click return to save your edits. | |
| HOST INFORMATION | |
|---|---|
|
Isolation Host Name
|
Populus |
|
Host Taxonomy ID
|
3689 |
| Host Gender |
|
| Host Race |
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| Host Age |
|
| Host Health Condition |
|
|
Health Disease Status
|
|
| Patient Visit Number |
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| Host Medication |
|
| Medical Record Number |
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| Host Body Site |
|
| Host Body Subsite |
|
| Host Body Product |
|
| Host Specificity or Range |
|
| Host Comments |
|
| Host Diseases (MIGS-15) |
|
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