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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0292257
Biosample Name Sorted cell/s from seawater in Southern California Bight, CA, United States - Uncultured microbe JGI_Larkin.APRIL.SYBR.01.G18
Other Names
Habitat (MIGS-6) Seawater
Community sorted cell/s
Location Southern California Bight, CA, United States
Identifier Uncultured microbe JGI_Larkin.APRIL.SYBR.01.G18
NCBI Taxonomy ID
1561972  NCBI Metagenome Taxonomy
NCBI Taxonomy Name seawater metagenome
Add Date 2021-05-28
Biosample Description Sorted cell/s from seawater in Southern California Bight, CA, United States
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Coastal
Specific Ecosystem Unclassified
Ecosystem Path Id 4044
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 0
Number of Related Biosamples 632
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) seawater
Sample Collection Date (MIGS-5) 2021-04-14
Sample Collection Publication

Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean USA
Sample Collection Method
Sample Contact Name Alyse Larkin-Swartout
Sample Contact Email [email protected]
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) USA: California
Latitude (MIGS-4.1) 33.6062
Longitude (MIGS-4.2) -117.9312
LatLong Information
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
ENVO_ID ENVO_00000447
ENVO_TERM marine biome
Local Environmental Context (MIxS:0000013)
ENVO_ID ENVO_02000049
ENVO_TERM coastal water body
Environmental Medium (MIxS:0000014)
ENVO_ID ENVO_00002150
ENVO_TERM coastal sea water
Altitude  (meter)  (MIGS-4.4)
Elevation
0
Meters.
Depth (MIGS-4.3)
0
Meters.
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  Seawater
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions

 

 

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