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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0289268
Biosample Name Enriched cells of subseafloor coalbed in Japanese EEZ, North Pacific Ocean - Sorted_minimetagenome_CSP506582_6119.15R2.36.T2.MeAM.D4
Other Names
Habitat (MIGS-6) Subseafloor coal bed
Community enriched cells
Location Japanese EEZ, North Pacific Ocean
Identifier Sorted_minimetagenome_CSP506582_6119.15R2.36.T2.MeAM.D4
NCBI Taxonomy ID
1564682  NCBI Metagenome Taxonomy
NCBI Taxonomy Name subsurface metagenome
Add Date 2021-04-01
Biosample Description Enriched cells of subseafloor coalbed in Japanese EEZ, North Pacific Ocean
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Deep subsurface
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
Ecosystem Path Id 4245
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 1
Number of Related Biosamples 14
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) Subseafloor coal bed
Sample Collection Date (MIGS-5) 9/30/2012
Sample Collection Publication
Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean Pacific Ocean
Sample Collection Method
Sample Contact Name Elizabeth Trembath-Reichert
Sample Contact Email [email protected]
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) North Pacific Ocean
Latitude (MIGS-4.1) 41.1766
Longitude (MIGS-4.2) 142.2005
LatLong Information
Geographical Map
Broad-scale environmental context (MIxS:0000012)
Local environmental context (MIxS:0000013)
Environmental medium (MIxS:0000014)
Altitude  (meter)  (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
1180
Meters.
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  Subseafloor coal bed
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions

 

 

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