Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
 - indicates that you can edit this field inline. Click return to save your edits. | |||||
| BIOSAMPLE INFORMATION | |||||
|---|---|---|---|---|---|
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GOLD Biosample ID
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Gb0280264 |
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Biosample Name
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Sorted cell/s from microbial mat in river backwater pond, North Slope, Alaska, USA - Uncultured microbe JGI_EMERSN.Seep2C.SYBR.3.M14 |
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Other Names
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Habitat
(MIGS-6)
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freshwater ferric oxide microbial mat |
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Community
|
sorted cell/s |
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Location
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river backwater pond, North Slope, Alaska, USA |
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Identifier
|
Uncultured microbe JGI_EMERSN.Seep2C.SYBR.3.M14 |
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NCBI Taxonomy ID
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NCBI Taxonomy Name
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microbial mat metagenome |
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Add Date
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2021-01-21 |
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Biosample Description
|
Sorted cell/s from microbial mat in river backwater pond, North Slope, Alaska, USA |
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Biosample Information Visibility
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Public | ||||
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ECOSYSTEM CLASSIFICATION
|
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| Ecosystem |
Environmental |
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| Ecosystem Category |
Aquatic |
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| Ecosystem Type |
Freshwater |
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| Ecosystem Subtype |
River |
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| Specific Ecosystem |
Microbial mats |
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| Ecosystem Path Id |
5347 |
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| BIOSAMPLE COMPOSITION | |||||
| Number of Studies |
1 |
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| Number of Seq Projects |
1 |
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| Number of Analysis Projects |
0 |
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| Number of Related Biosamples |
120 |
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| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
freshwater river backwater pond Fe-oxide mat |
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Sample Collection Date
(MIGS-5)
|
2019-06-28 |
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Sample Collection Publication
|
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| Sample Isolation Comments |
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Size Fraction
|
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| Sample Isolation Country/Ocean |
USA |
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Sample Collection Method
|
|
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Sample Contact Name
|
Alex Michaud |
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Sample Contact Email
|
[email protected] |
| SIP METADATA | |
| Sample Volume (ul) |
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| Concentration (ng/ul) |
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| Fraction Density (g/ml) |
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| Sample Group Name |
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| Isotope Label |
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| - indicates that you can edit this field inline. Click return to save your edits. | |||||
| ENVIRONMENTAL INFORMATION | |||||
|---|---|---|---|---|---|
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Geographic Location
(MIGS-4)
|
USA: Alaska |
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Latitude
(MIGS-4.1)
|
68.6721 |
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Longitude
(MIGS-4.2)
|
-149.1359 |
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LatLong Information
|
|
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| Geographical Map | |||||
| Broad-scale Environmental Context (MIxS:0000012) |
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| Local Environmental Context (MIxS:0000013) |
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| Environmental Medium (MIxS:0000014) |
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Altitude
(meter)
(MIGS-4.4)
|
|
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| Elevation |
900 Meters.
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Depth
(MIGS-4.3)
|
|
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| Subsurface Depth |
|
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| Sample Collection Temperature |
|
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| Salinity (MIGS-6.3) |
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| Pressure |
|
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| pH |
|
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| Chlorophyll Concentration |
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| Nitrate Concentration |
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| Oxygen Concentration |
|
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| Salinity Concentration |
|
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| Methane Concentration (mmol) |
|
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Sample Conductivity
|
|
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| Habitat |
freshwater ferric oxide microbial mat |
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| Bicarbonate Concentration (mM) |
|
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| Soluble Iron Concentration (uM) |
|
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| Hydrogen Sulfide Concentration (mM) |
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| Hydrogen Sulfide Presence |
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| Irradiance |
|
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| Oxygen Presence |
|
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| GROWTH CONDITIONS | |||||
| Growth Conditions |
|
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