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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0204933
Biosample Name Human adult male fecal microbial communities from Ikoma, Japan - F1-S
Other Names
Habitat (MIGS-6) Human adult male fecal
Community microbial communities
Location from Ikoma, Japan
Identifier F1-S
NCBI Taxonomy ID
  NCBI Metagenome Taxonomy
NCBI Taxonomy Name
Add Date 2019-01-30
Biosample Description Human adult male fecal microbial communities from Ikoma, Japan
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Mammals: Human
Ecosystem Type Digestive system
Ecosystem Subtype Large intestine
Specific Ecosystem Fecal
Ecosystem Path Id 3920
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 1
Number of Related Biosamples 5
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) feces from healthy human sample F1-S, Adult, Male
Sample Collection Date (MIGS-5)
Sample Collection Publication

Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean Japan
Sample Collection Method
Sample Contact Name
Sample Contact Email
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Japan: Ikoma
Latitude (MIGS-4.1) 34.7321
Longitude (MIGS-4.2) 135.7306
LatLong Information
Geographical Map
Broad-scale environmental context (MIxS:0000012)
Local environmental context (MIxS:0000013)
Environmental medium (MIxS:0000014)
Altitude  (meter)  (MIGS-4.4)
Elevation
Depth (MIGS-4.3)
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  Human adult male fecal
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions
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HOST INFORMATION
Isolation Host Name Homo sapiens
Host Taxonomy ID 9606
Host Gender
Host Race
Host Age
Host Health Condition
Health Disease Status
Patient Visit Number
Host Medication
Medical Record Number
Host Body Site
Host Body Subsite
Host Body Product Feces
Host Specificity or Range
Host Comments feces from healthy human sample F1-S, Adult, Male
Host Diseases (MIGS-15)

 

 

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