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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0191650
Biosample Name Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_122
Other Names
Habitat (MIGS-6) bulk soil
Community microbial communities
Location The East River watershed near Crested Butte, Colorado, USA
Identifier ER_122
NCBI Taxonomy ID
410658  NCBI Metagenome Taxonomy
NCBI Taxonomy Name soil metagenome
Add Date 2018-06-22
Biosample Description Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Soil
Ecosystem Subtype Floodplain
Specific Ecosystem Unclassified
Ecosystem Path Id 5610
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 2
Number of Analysis Projects 5
Number of Related Biosamples 47
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) soil
Sample Collection Date (MIGS-5) 3/7/2017
Sample Collection Publication

Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean USA
Sample Collection Method
Sample Contact Name Eoin Brodie
Sample Contact Email [email protected]
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) USA: Colorado
Latitude (MIGS-4.1) 38.920405996
Longitude (MIGS-4.2) -106.948286622
LatLong Information
Geographical Map
Broad-scale Environmental Context (MIxS:0000012) grassland biome (ENVO_01000177)
Local Environmental Context (MIxS:0000013) meadow ecosystem (ENVO_00000108)
Environmental Medium (MIxS:0000014) bulk soil (ENVO_00005802)
Altitude  (meter)  (MIGS-4.4)
Elevation
2780
Meters.
Depth (MIGS-4.3) Range is 0.05 to 0.15 Meters.
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  bulk soil
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions
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SOIL ENVIRONMENTAL INFORMATION
Soil Depth  (meter)  (MIGS-4.3)
Soil Elevation  (meter) 
Mean Annual Precipitation  (millimeter) 
Mean Seasonal Precipitation  (millimeter) 
Mean Annual Temperature  (Celsius) 
Mean Seasonal Temperature  (Celsius) 
Link Climate Info
LAND USE & HISTORICAL DATA
Crop Rotation
Current Land Use
Current Vegetation
Current Vegetation Method
Fire
Flooding
Extreme Event
Previous Land Use
Previous Land Use Method
PHYSICOCHEMICAL PROPERTIES
Drainage Class
FAO Class
Horizon
Horizon Method
Link Class Info
Local Class
Local Class Method
Profile Position
Sieving
Slope Aspect  (degrees) 
Slope Gradient  (percent) 
Texture
Texture Method
Tillage
Soil Type
Soil Type Method
Aluminium Saturation  (percent) 
Aluminium Saturation Method
Heavy Metals  (microg/gram) 
Heavy Metals Method
Microbial Biomass
Microbial Biomass Method
Soil pH
pH Method
Soil Salinity (MIGS-6.3)
Salinity Method
Total Nitrogen
Total Nitrogen Method
Total Organic Carbon  (grams/kilogram) 
Total Organic Carbon Method
Water Content
Water Content Soil Method
Link Addit Analysis
Miscellaneous Parameters
Agrochem Addition
SAMPLE PREPARATION
Pool DNA Extracts
Soil Sample Biomass
Soil Sample Volume/Weight DNA Extraction
Storage Conditions
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