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BIOSAMPLE INFORMATION | |||||
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GOLD Biosample ID
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Gb0191650 |
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Biosample Name
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Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_122 |
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Other Names
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Habitat
(MIGS-6)
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bulk soil |
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Community
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microbial communities |
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Location
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The East River watershed near Crested Butte, Colorado, USA |
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Identifier
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ER_122 |
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NCBI Taxonomy ID
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NCBI Taxonomy Name
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soil metagenome |
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Add Date
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2018-06-22 |
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Biosample Description
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Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States |
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Biosample Information Visibility
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Public | ||||
ECOSYSTEM CLASSIFICATION
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Ecosystem |
Environmental |
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Ecosystem Category |
Terrestrial |
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Ecosystem Type |
Soil |
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Ecosystem Subtype |
Floodplain |
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Specific Ecosystem |
Unclassified |
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Ecosystem Path Id |
5610 |
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BIOSAMPLE COMPOSITION | |||||
Number of Studies |
1 |
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Number of Seq Projects |
2 |
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Number of Analysis Projects |
5 |
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Number of Related Biosamples |
47 |
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BIOSAMPLE ISOLATION | |
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Sample Collection Site
(MIGS-13)
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soil |
Sample Collection Date
(MIGS-5)
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3/7/2017 |
Sample Collection Publication
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Sample Isolation Comments |
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Size Fraction
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Sample Isolation Country/Ocean |
USA |
Sample Collection Method
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Sample Contact Name
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Eoin Brodie |
Sample Contact Email
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[email protected] |
SIP METADATA | |
Sample Volume (ul) |
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Concentration (ng/ul) |
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Fraction Density (g/ml) |
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Sample Group Name |
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Isotope Label |
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ENVIRONMENTAL INFORMATION | |
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Geographic Location
(MIGS-4)
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USA: Colorado |
Latitude
(MIGS-4.1)
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38.920405996 |
Longitude
(MIGS-4.2)
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-106.948286622 |
LatLong Information
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Geographical Map | |
Broad-scale Environmental Context (MIxS:0000012) |
grassland biome (ENVO_01000177)
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Local Environmental Context (MIxS:0000013) |
meadow ecosystem (ENVO_00000108)
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Environmental Medium (MIxS:0000014) |
bulk soil (ENVO_00005802)
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Altitude
(meter)
(MIGS-4.4)
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Elevation |
2780 Meters.
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Depth
(MIGS-4.3)
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Range is 0.05 to 0.15 Meters. |
Subsurface Depth |
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Sample Collection Temperature |
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Salinity (MIGS-6.3) |
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Pressure |
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pH |
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Chlorophyll Concentration |
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Nitrate Concentration |
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Oxygen Concentration |
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Salinity Concentration |
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Methane Concentration (mmol) |
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Sample Conductivity
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Habitat |
bulk soil |
Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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Oxygen Presence |
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GROWTH CONDITIONS | |
Growth Conditions |
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SOIL ENVIRONMENTAL INFORMATION | |
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Soil Depth
(meter)
(MIGS-4.3)
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Soil Elevation (meter) |
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Mean Annual Precipitation
(millimeter)
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Mean Seasonal Precipitation
(millimeter)
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Mean Annual Temperature (Celsius) |
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Mean Seasonal Temperature (Celsius) |
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Link Climate Info |
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LAND USE & HISTORICAL DATA | |
Crop Rotation |
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Current Land Use
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Current Vegetation
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Current Vegetation Method
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Fire
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Flooding
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Extreme Event
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Previous Land Use |
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Previous Land Use Method
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PHYSICOCHEMICAL PROPERTIES | |
Drainage Class
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FAO Class
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Horizon
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Horizon Method
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Link Class Info
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Local Class
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Local Class Method
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Profile Position
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Sieving |
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Slope Aspect
(degrees)
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Slope Gradient
(percent)
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Texture
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Texture Method
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Tillage
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Soil Type
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Soil Type Method |
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Aluminium Saturation
(percent)
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Aluminium Saturation Method
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Heavy Metals
(microg/gram)
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Heavy Metals Method
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Microbial Biomass
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Microbial Biomass Method
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Soil pH |
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pH Method
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Soil Salinity (MIGS-6.3) |
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Salinity Method
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Total Nitrogen
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Total Nitrogen Method
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Total Organic Carbon (grams/kilogram) |
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Total Organic Carbon Method
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Water Content
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Water Content Soil Method
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Link Addit Analysis
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Miscellaneous Parameters
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Agrochem Addition
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SAMPLE PREPARATION | |
Pool DNA Extracts
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Soil Sample Biomass |
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Soil Sample Volume/Weight DNA Extraction |
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Storage Conditions
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Package Version |
6 |
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