Studies
|
56,329 |
|
Biosamples
|
196,776 |
|
Sequencing Projects
|
525,145 |
|
Analysis Projects
|
385,404 |
| Organisms | 484,215 |
 - indicates that you can edit this field inline. Click return to save your edits. | |||||
| BIOSAMPLE INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Biosample ID
|
Gb0145187 |
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Biosample Name
|
Synthetic bacterial communities of pure cultures from sediment of Lake Washington, USA, under low oxygen conditions - MT methane_oxidizing 4strains_24hour-a |
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Other Names
|
|
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Habitat
(MIGS-6)
|
Synthetic |
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Community
|
bacterial communities |
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Location
|
pure cultures from sediment of Lake Washington, USA |
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Identifier
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MT methane_oxidizing 4strains_24hour-a |
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NCBI Taxonomy ID
|
|
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NCBI Taxonomy Name
|
synthetic metagenome |
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Add Date
|
2016-12-14 |
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Biosample Description
|
Bacterial community was grown with methane serving as a single source of carbon under low oxygen condition |
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Biosample Information Visibility
|
Public | ||||
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ECOSYSTEM CLASSIFICATION
|
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| Ecosystem |
Engineered |
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| Ecosystem Category |
Modeled |
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| Ecosystem Type |
Simulated communities (microbial mixture) |
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| Ecosystem Subtype |
Unclassified |
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| Specific Ecosystem |
Unclassified |
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| Ecosystem Path Id |
4308 |
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| BIOSAMPLE COMPOSITION | |||||
| Number of Studies |
1 |
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| Number of Seq Projects |
1 |
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| Number of Analysis Projects |
2 |
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| Number of Related Biosamples |
11 |
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| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
microcosm of pure cultures from sediment of Lake Washington, USA |
|
Sample Collection Date
(MIGS-5)
|
2016-09-14 |
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Sample Collection Publication
|
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| Sample Isolation Comments |
|
|
Size Fraction
|
|
| Sample Isolation Country/Ocean |
USA |
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Sample Collection Method
|
|
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Sample Contact Name
|
Ludmila Chistoserdova |
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Sample Contact Email
|
[email protected] |
| SIP METADATA | |
| Sample Volume (ul) |
|
| Concentration (ng/ul) |
|
| Fraction Density (g/ml) |
|
| Sample Group Name |
|
| Isotope Label |
|
| - indicates that you can edit this field inline. Click return to save your edits. | |
| ENVIRONMENTAL INFORMATION | |
|---|---|
|
Geographic Location
(MIGS-4)
|
USA: Washington |
|
Latitude
(MIGS-4.1)
|
47.6553 |
|
Longitude
(MIGS-4.2)
|
-122.3035 |
|
LatLong Information
|
|
| Geographical Map | |
| Broad-scale Environmental Context (MIxS:0000012) |
|
| Local Environmental Context (MIxS:0000013) |
|
| Environmental Medium (MIxS:0000014) |
|
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Altitude
(meter)
(MIGS-4.4)
|
|
| Elevation |
0 Meters.
|
|
Depth
(MIGS-4.3)
|
0 Meters.
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| pH |
|
| Chlorophyll Concentration |
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| Nitrate Concentration |
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| Oxygen Concentration |
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| Salinity Concentration |
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| Methane Concentration (mmol) |
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Sample Conductivity
|
|
| Habitat |
Synthetic |
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
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| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| Oxygen Presence |
|
| GROWTH CONDITIONS | |
| Growth Conditions |
|
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