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BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0124920
Biosample Name Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541
Other Names
Habitat (MIGS-6) Estuarine
Community microbial communities
Location Columbia River estuary
Identifier Freshwater metaG S.541
NCBI Taxonomy ID
408172  NCBI Metagenome Taxonomy
NCBI Taxonomy Name marine metagenome
Add Date 2015-12-17
Biosample Description
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Marine
Ecosystem Subtype Intertidal zone
Specific Ecosystem Estuary
Ecosystem Path Id 4015
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 4
Number of Related Biosamples 185
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BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) Columbia River Estuary
Sample Collection Date (MIGS-5) 2014-04-29
Sample Collection Publication

Sample Isolation Comments
Size Fraction
Sample Isolation Country/Ocean USA
Sample Collection Method
Sample Contact Name Holly Simon
Sample Contact Email [email protected]
SIP METADATA
Sample Volume (ul)
Concentration (ng/ul)
Fraction Density (g/ml)
Sample Group Name
Isotope Label
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ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) Columbia River Estuary, USA
Latitude (MIGS-4.1) 46.2
Longitude (MIGS-4.2) -123.94
LatLong Information
Geographical Map
Broad-scale Environmental Context (MIxS:0000012)
ENVO_ID ENVO_01000020
ENVO_TERM estuarine biome
Local Environmental Context (MIxS:0000013)
ENVO_ID ENVO_00000045
ENVO_TERM estuary
Environmental Medium (MIxS:0000014)
ENVO_ID ENVO_01000301
ENVO_TERM estuarine water
Altitude  (meter)  (MIGS-4.4)
Elevation
2
Meters.
Depth (MIGS-4.3)
Subsurface Depth
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Sample Conductivity
Habitat  Estuarine
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions

 

 

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